Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.72■■■□□ 2.67
KCNQ3O43525 BHLHE23-202ENST00000612929 1109 ntBASIC31.72■■■□□ 2.67
KCNQ3O43525 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.72■■■□□ 2.67
KCNQ3O43525 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNQ3O43525 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
KCNQ3O43525 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
KCNQ3O43525 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.71■■■□□ 2.67
KCNQ3O43525 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
KCNQ3O43525 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.7■■■□□ 2.67
KCNQ3O43525 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
KCNQ3O43525 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
KCNQ3O43525 AC018755.3-202ENST00000596210 929 ntBASIC31.69■■■□□ 2.66
KCNQ3O43525 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
KCNQ3O43525 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
KCNQ3O43525 KRT8P33-201ENST00000508125 1423 ntBASIC31.68■■■□□ 2.66
KCNQ3O43525 AC103834.1-201ENST00000520383 144 ntBASIC31.68■■■□□ 2.66
KCNQ3O43525 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.68■■■□□ 2.66
KCNQ3O43525 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
KCNQ3O43525 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.67■■■□□ 2.66
KCNQ3O43525 AL451085.2-201ENST00000605085 799 ntBASIC31.67■■■□□ 2.66
KCNQ3O43525 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.66■■■□□ 2.66
KCNQ3O43525 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.66■■■□□ 2.66
KCNQ3O43525 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
KCNQ3O43525 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
KCNQ3O43525 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
KCNQ3O43525 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.65■■■□□ 2.66
KCNQ3O43525 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
KCNQ3O43525 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
KCNQ3O43525 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.65■■■□□ 2.66
KCNQ3O43525 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
KCNQ3O43525 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
KCNQ3O43525 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
KCNQ3O43525 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
KCNQ3O43525 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.64■■■□□ 2.66
KCNQ3O43525 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
KCNQ3O43525 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
KCNQ3O43525 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
KCNQ3O43525 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.64■■■□□ 2.66
KCNQ3O43525 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.63■■■□□ 2.65
KCNQ3O43525 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
KCNQ3O43525 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
KCNQ3O43525 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
KCNQ3O43525 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
KCNQ3O43525 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
KCNQ3O43525 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.62■■■□□ 2.65
KCNQ3O43525 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
KCNQ3O43525 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.61■■■□□ 2.65
KCNQ3O43525 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
KCNQ3O43525 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.61■■■□□ 2.65
KCNQ3O43525 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.61■■■□□ 2.65
KCNQ3O43525 AC139795.1-202ENST00000500444 432 ntBASIC31.61■■■□□ 2.65
KCNQ3O43525 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
KCNQ3O43525 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
KCNQ3O43525 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
KCNQ3O43525 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.6■■■□□ 2.65
KCNQ3O43525 BX255925.1-201ENST00000566954 1854 ntBASIC31.6■■■□□ 2.65
KCNQ3O43525 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
KCNQ3O43525 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
KCNQ3O43525 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
KCNQ3O43525 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.58■■■□□ 2.65
KCNQ3O43525 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.58■■■□□ 2.65
KCNQ3O43525 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
KCNQ3O43525 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
KCNQ3O43525 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
KCNQ3O43525 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
KCNQ3O43525 AC074183.2-201ENST00000623112 922 ntBASIC31.57■■■□□ 2.64
KCNQ3O43525 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
KCNQ3O43525 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
KCNQ3O43525 AL035685.1-201ENST00000636663 812 ntBASIC31.56■■■□□ 2.64
KCNQ3O43525 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
KCNQ3O43525 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
KCNQ3O43525 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.55■■■□□ 2.64
KCNQ3O43525 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
KCNQ3O43525 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.55■■■□□ 2.64
KCNQ3O43525 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
KCNQ3O43525 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
KCNQ3O43525 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KCNQ3O43525 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.54■■■□□ 2.64
KCNQ3O43525 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
KCNQ3O43525 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.54■■■□□ 2.64
KCNQ3O43525 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
KCNQ3O43525 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
KCNQ3O43525 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
KCNQ3O43525 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.53■■■□□ 2.64
KCNQ3O43525 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
KCNQ3O43525 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KCNQ3O43525 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
KCNQ3O43525 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
KCNQ3O43525 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.51■■■□□ 2.63
KCNQ3O43525 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.51■■■□□ 2.63
KCNQ3O43525 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
KCNQ3O43525 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
KCNQ3O43525 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
KCNQ3O43525 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
KCNQ3O43525 AC142086.6-201ENST00000621154 1765 ntBASIC31.49■■■□□ 2.63
KCNQ3O43525 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
KCNQ3O43525 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KCNQ3O43525 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KCNQ3O43525 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.49■■■□□ 2.63
KCNQ3O43525 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms