Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TRIM11Q96F44 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TRIM11Q96F44 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.96■■□□□ 1.75
TRIM11Q96F44 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.96■■□□□ 1.75
TRIM11Q96F44 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.96■■□□□ 1.75
TRIM11Q96F44 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TRIM11Q96F44 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.96■■□□□ 1.75
TRIM11Q96F44 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TRIM11Q96F44 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TRIM11Q96F44 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
TRIM11Q96F44 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TRIM11Q96F44 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TRIM11Q96F44 MIR3648-2-201ENST00000581792 180 ntBASIC25.95■■□□□ 1.74
TRIM11Q96F44 MIR3648-1-201ENST00000615959 180 ntBASIC25.95■■□□□ 1.74
TRIM11Q96F44 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.95■■□□□ 1.74
TRIM11Q96F44 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.95■■□□□ 1.74
TRIM11Q96F44 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
TRIM11Q96F44 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
TRIM11Q96F44 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.94■■□□□ 1.74
TRIM11Q96F44 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TRIM11Q96F44 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
TRIM11Q96F44 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.93■■□□□ 1.74
TRIM11Q96F44 AL359258.2-201ENST00000564063 1566 ntBASIC25.93■■□□□ 1.74
TRIM11Q96F44 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TRIM11Q96F44 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM11Q96F44 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM11Q96F44 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM11Q96F44 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.92■■□□□ 1.74
TRIM11Q96F44 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
TRIM11Q96F44 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM11Q96F44 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM11Q96F44 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM11Q96F44 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM11Q96F44 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM11Q96F44 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.91■■□□□ 1.74
TRIM11Q96F44 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM11Q96F44 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM11Q96F44 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.89■■□□□ 1.74
TRIM11Q96F44 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM11Q96F44 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
TRIM11Q96F44 AC126177.7-201ENST00000547904 679 ntBASIC25.89■■□□□ 1.74
TRIM11Q96F44 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.89■■□□□ 1.74
TRIM11Q96F44 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TRIM11Q96F44 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRIM11Q96F44 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRIM11Q96F44 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
TRIM11Q96F44 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.88■■□□□ 1.73
TRIM11Q96F44 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIM11Q96F44 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIM11Q96F44 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIM11Q96F44 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TRIM11Q96F44 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
TRIM11Q96F44 AC016575.1-201ENST00000607026 382 ntBASIC25.86■■□□□ 1.73
TRIM11Q96F44 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
TRIM11Q96F44 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TRIM11Q96F44 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.85■■□□□ 1.73
TRIM11Q96F44 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
TRIM11Q96F44 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.85■■□□□ 1.73
TRIM11Q96F44 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
TRIM11Q96F44 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.84■■□□□ 1.73
TRIM11Q96F44 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM11Q96F44 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.84■■□□□ 1.73
TRIM11Q96F44 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.83■■□□□ 1.73
TRIM11Q96F44 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM11Q96F44 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM11Q96F44 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM11Q96F44 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM11Q96F44 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM11Q96F44 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.82■■□□□ 1.72
TRIM11Q96F44 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.82■■□□□ 1.72
TRIM11Q96F44 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM11Q96F44 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.82■■□□□ 1.72
TRIM11Q96F44 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM11Q96F44 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM11Q96F44 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM11Q96F44 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM11Q96F44 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM11Q96F44 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM11Q96F44 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.81■■□□□ 1.72
TRIM11Q96F44 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM11Q96F44 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.81■■□□□ 1.72
TRIM11Q96F44 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM11Q96F44 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM11Q96F44 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM11Q96F44 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM11Q96F44 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TRIM11Q96F44 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRIM11Q96F44 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.8■■□□□ 1.72
TRIM11Q96F44 AL359504.2-201ENST00000605506 1601 ntBASIC25.8■■□□□ 1.72
TRIM11Q96F44 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
TRIM11Q96F44 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TRIM11Q96F44 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRIM11Q96F44 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRIM11Q96F44 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TRIM11Q96F44 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.78■■□□□ 1.72
TRIM11Q96F44 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRIM11Q96F44 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRIM11Q96F44 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TRIM11Q96F44 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRIM11Q96F44 AC010501.1-201ENST00000606270 1962 ntBASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms