Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HPS1Q92902 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.04■■□□□ 1.12
HPS1Q92902 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS1Q92902 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS1Q92902 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS1Q92902 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HPS1Q92902 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.04■■□□□ 1.12
HPS1Q92902 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HPS1Q92902 LINC00543-201ENST00000567234 1845 ntBASIC22.03■■□□□ 1.12
HPS1Q92902 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HPS1Q92902 CLDN5-201ENST00000403084 2357 ntBASIC22.03■■□□□ 1.12
HPS1Q92902 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HPS1Q92902 MIR3648-2-201ENST00000581792 180 ntBASIC22.03■■□□□ 1.12
HPS1Q92902 MIR3648-1-201ENST00000615959 180 ntBASIC22.03■■□□□ 1.12
HPS1Q92902 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HPS1Q92902 AC012676.1-201ENST00000574705 1949 ntBASIC22.03■■□□□ 1.12
HPS1Q92902 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
HPS1Q92902 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.03■■□□□ 1.12
HPS1Q92902 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HPS1Q92902 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HPS1Q92902 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HPS1Q92902 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.02■■□□□ 1.12
HPS1Q92902 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.02■■□□□ 1.12
HPS1Q92902 DUX4L11-201ENST00000611504 1267 ntBASIC22.02■■□□□ 1.12
HPS1Q92902 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HPS1Q92902 DUX4L12-201ENST00000614593 1267 ntBASIC22.02■■□□□ 1.12
HPS1Q92902 DUX4L14-201ENST00000621227 1267 ntBASIC22.02■■□□□ 1.12
HPS1Q92902 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.02■■□□□ 1.12
HPS1Q92902 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
HPS1Q92902 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HPS1Q92902 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HPS1Q92902 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
HPS1Q92902 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HPS1Q92902 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HPS1Q92902 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HPS1Q92902 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HPS1Q92902 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HPS1Q92902 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.01■■□□□ 1.11
HPS1Q92902 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HPS1Q92902 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HPS1Q92902 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HPS1Q92902 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22■■□□□ 1.11
HPS1Q92902 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22■■□□□ 1.11
HPS1Q92902 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22■■□□□ 1.11
HPS1Q92902 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HPS1Q92902 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HPS1Q92902 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HPS1Q92902 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22■■□□□ 1.11
HPS1Q92902 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
HPS1Q92902 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HPS1Q92902 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HPS1Q92902 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.98■■□□□ 1.11
HPS1Q92902 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HPS1Q92902 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
HPS1Q92902 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.98■■□□□ 1.11
HPS1Q92902 AC016575.1-201ENST00000607026 382 ntBASIC21.98■■□□□ 1.11
HPS1Q92902 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
HPS1Q92902 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HPS1Q92902 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HPS1Q92902 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HPS1Q92902 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HPS1Q92902 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.97■■□□□ 1.11
HPS1Q92902 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HPS1Q92902 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.97■■□□□ 1.11
HPS1Q92902 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HPS1Q92902 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HPS1Q92902 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.96■■□□□ 1.11
HPS1Q92902 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
HPS1Q92902 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
HPS1Q92902 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
HPS1Q92902 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
HPS1Q92902 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HPS1Q92902 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.96■■□□□ 1.11
HPS1Q92902 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
HPS1Q92902 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HPS1Q92902 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.95■■□□□ 1.1
HPS1Q92902 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HPS1Q92902 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.95■■□□□ 1.1
HPS1Q92902 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HPS1Q92902 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HPS1Q92902 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HPS1Q92902 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HPS1Q92902 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.94■■□□□ 1.1
HPS1Q92902 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.94■■□□□ 1.1
HPS1Q92902 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HPS1Q92902 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HPS1Q92902 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HPS1Q92902 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HPS1Q92902 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HPS1Q92902 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HPS1Q92902 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HPS1Q92902 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HPS1Q92902 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HPS1Q92902 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.93■■□□□ 1.1
HPS1Q92902 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HPS1Q92902 CR559946.2-201ENST00000623684 991 ntBASIC21.92■■□□□ 1.1
HPS1Q92902 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HPS1Q92902 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HPS1Q92902 AC079834.2-201ENST00000609776 1949 ntBASIC21.91■■□□□ 1.1
HPS1Q92902 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms