Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.79■■■□□ 2.68
LINC00116Q8NCU8 AP002414.2-202ENST00000590929 1450 ntBASIC31.78■■■□□ 2.68
LINC00116Q8NCU8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
LINC00116Q8NCU8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LINC00116Q8NCU8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
LINC00116Q8NCU8 AL359504.2-201ENST00000605506 1601 ntBASIC31.78■■■□□ 2.68
LINC00116Q8NCU8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
LINC00116Q8NCU8 AL356441.2-201ENST00000443009 864 ntBASIC31.77■■■□□ 2.68
LINC00116Q8NCU8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
LINC00116Q8NCU8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
LINC00116Q8NCU8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.76■■■□□ 2.68
LINC00116Q8NCU8 AL139393.2-201ENST00000608721 2025 ntBASIC31.76■■■□□ 2.68
LINC00116Q8NCU8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
LINC00116Q8NCU8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
LINC00116Q8NCU8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.76■■■□□ 2.67
LINC00116Q8NCU8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
LINC00116Q8NCU8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
LINC00116Q8NCU8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
LINC00116Q8NCU8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.75■■■□□ 2.67
LINC00116Q8NCU8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
LINC00116Q8NCU8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
LINC00116Q8NCU8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
LINC00116Q8NCU8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.73■■■□□ 2.67
LINC00116Q8NCU8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
LINC00116Q8NCU8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
LINC00116Q8NCU8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
LINC00116Q8NCU8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.72■■■□□ 2.67
LINC00116Q8NCU8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
LINC00116Q8NCU8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.72■■■□□ 2.67
LINC00116Q8NCU8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
LINC00116Q8NCU8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.71■■■□□ 2.67
LINC00116Q8NCU8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
LINC00116Q8NCU8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
LINC00116Q8NCU8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.7■■■□□ 2.67
LINC00116Q8NCU8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.7■■■□□ 2.67
LINC00116Q8NCU8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
LINC00116Q8NCU8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
LINC00116Q8NCU8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
LINC00116Q8NCU8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
LINC00116Q8NCU8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
LINC00116Q8NCU8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.69■■■□□ 2.66
LINC00116Q8NCU8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
LINC00116Q8NCU8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
LINC00116Q8NCU8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.68■■■□□ 2.66
LINC00116Q8NCU8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.67■■■□□ 2.66
LINC00116Q8NCU8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
LINC00116Q8NCU8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
LINC00116Q8NCU8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
LINC00116Q8NCU8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
LINC00116Q8NCU8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
LINC00116Q8NCU8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
LINC00116Q8NCU8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
LINC00116Q8NCU8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
LINC00116Q8NCU8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.66■■■□□ 2.66
LINC00116Q8NCU8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
LINC00116Q8NCU8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.65■■■□□ 2.66
LINC00116Q8NCU8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.65■■■□□ 2.66
LINC00116Q8NCU8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
LINC00116Q8NCU8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.64■■■□□ 2.66
LINC00116Q8NCU8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
LINC00116Q8NCU8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
LINC00116Q8NCU8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
LINC00116Q8NCU8 AC239859.2-201ENST00000444165 318 ntBASIC31.63■■■□□ 2.65
LINC00116Q8NCU8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.63■■■□□ 2.65
LINC00116Q8NCU8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
LINC00116Q8NCU8 AC019171.1-201ENST00000601251 1056 ntBASIC31.63■■■□□ 2.65
LINC00116Q8NCU8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
LINC00116Q8NCU8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
LINC00116Q8NCU8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.61■■■□□ 2.65
LINC00116Q8NCU8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.61■■■□□ 2.65
LINC00116Q8NCU8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
LINC00116Q8NCU8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
LINC00116Q8NCU8 AC087393.1-201ENST00000582896 145 ntBASIC31.6■■■□□ 2.65
LINC00116Q8NCU8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.6■■■□□ 2.65
LINC00116Q8NCU8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
LINC00116Q8NCU8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
LINC00116Q8NCU8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.59■■■□□ 2.65
LINC00116Q8NCU8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
LINC00116Q8NCU8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
LINC00116Q8NCU8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
LINC00116Q8NCU8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
LINC00116Q8NCU8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.58■■■□□ 2.65
LINC00116Q8NCU8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
LINC00116Q8NCU8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
LINC00116Q8NCU8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.57■■■□□ 2.64
LINC00116Q8NCU8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
LINC00116Q8NCU8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
LINC00116Q8NCU8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
LINC00116Q8NCU8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.56■■■□□ 2.64
LINC00116Q8NCU8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
LINC00116Q8NCU8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
LINC00116Q8NCU8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
LINC00116Q8NCU8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
LINC00116Q8NCU8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
LINC00116Q8NCU8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
LINC00116Q8NCU8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.55■■■□□ 2.64
LINC00116Q8NCU8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.55■■■□□ 2.64
LINC00116Q8NCU8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.55■■■□□ 2.64
LINC00116Q8NCU8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
LINC00116Q8NCU8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms