Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.97■■□□□ 1.11
LCN1P1Q5VSP4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LCN1P1Q5VSP4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
LCN1P1Q5VSP4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LCN1P1Q5VSP4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.95■■□□□ 1.11
LCN1P1Q5VSP4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 AL162393.1-201ENST00000437852 946 ntBASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LCN1P1Q5VSP4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.93■■□□□ 1.1
LCN1P1Q5VSP4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LCN1P1Q5VSP4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.93■■□□□ 1.1
LCN1P1Q5VSP4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P1Q5VSP4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P1Q5VSP4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P1Q5VSP4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LCN1P1Q5VSP4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LCN1P1Q5VSP4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LCN1P1Q5VSP4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
LCN1P1Q5VSP4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.89■■□□□ 1.09
LCN1P1Q5VSP4 AC021231.2-201ENST00000594613 730 ntBASIC21.89■■□□□ 1.09
LCN1P1Q5VSP4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
LCN1P1Q5VSP4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LCN1P1Q5VSP4 DUX4L29-201ENST00000425409 679 ntBASIC21.88■■□□□ 1.09
LCN1P1Q5VSP4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms