Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCN1P1Q5VSP4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.98■■□□□ 1.11
LCN1P1Q5VSP4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.97■■□□□ 1.11
LCN1P1Q5VSP4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LCN1P1Q5VSP4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
LCN1P1Q5VSP4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LCN1P1Q5VSP4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.96■■□□□ 1.11
LCN1P1Q5VSP4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.95■■□□□ 1.11
LCN1P1Q5VSP4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.95■■□□□ 1.1
LCN1P1Q5VSP4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 AL162393.1-201ENST00000437852 946 ntBASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN1P1Q5VSP4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LCN1P1Q5VSP4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.93■■□□□ 1.1
LCN1P1Q5VSP4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LCN1P1Q5VSP4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.93■■□□□ 1.1
LCN1P1Q5VSP4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
LCN1P1Q5VSP4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.91■■□□□ 1.1
LCN1P1Q5VSP4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P1Q5VSP4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P1Q5VSP4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN1P1Q5VSP4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LCN1P1Q5VSP4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LCN1P1Q5VSP4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LCN1P1Q5VSP4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
LCN1P1Q5VSP4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.89■■□□□ 1.09
LCN1P1Q5VSP4 AC021231.2-201ENST00000594613 730 ntBASIC21.89■■□□□ 1.09
LCN1P1Q5VSP4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
LCN1P1Q5VSP4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LCN1P1Q5VSP4 DUX4L29-201ENST00000425409 679 ntBASIC21.88■■□□□ 1.09
LCN1P1Q5VSP4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P1Q5VSP4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P1Q5VSP4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms