Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 PRP40YKL012W 1752 nt8.09□□□□□ -1.11
UFD2P54860 HXT9YJL219W 1704 nt8.09□□□□□ -1.11
UFD2P54860 BUD9YGR041W 1644 nt8.08□□□□□ -1.12
UFD2P54860 CHA1YCL064C 1083 nt8.08□□□□□ -1.12
UFD2P54860 MTQ1YNL063W 945 nt8.08□□□□□ -1.12
UFD2P54860 YPL264CYPL264C 1062 nt8.08□□□□□ -1.12
UFD2P54860 YJL163CYJL163C 1668 nt8.08□□□□□ -1.12
UFD2P54860 FRT1YOR324C 1809 nt8.08□□□□□ -1.12
UFD2P54860 BRN1YBL097W 2265 nt8.07□□□□□ -1.12
UFD2P54860 YGR291CYGR291C 222 nt8.07□□□□□ -1.12
UFD2P54860 COX3Q0275 810 nt8.07□□□□□ -1.12
UFD2P54860 YLR412C-AYLR412C-A 207 nt8.07□□□□□ -1.12
UFD2P54860 YOL046CYOL046C 675 nt8.07□□□□□ -1.12
UFD2P54860 TSR3YOR006C 942 nt8.07□□□□□ -1.12
UFD2P54860 RPL43AYPR043W 279 nt8.07□□□□□ -1.12
UFD2P54860 YBR298C-AYBR298C-A 222 nt8.07□□□□□ -1.12
UFD2P54860 PEX34YCL056C 435 nt8.07□□□□□ -1.12
UFD2P54860 CDC16YKL022C 2523 nt8.07□□□□□ -1.12
UFD2P54860 APE4YHR113W 1473 nt8.06□□□□□ -1.12
UFD2P54860 MAL31YBR298C 1845 nt8.06□□□□□ -1.12
UFD2P54860 PMA2YPL036W 2844 nt8.06□□□□□ -1.12
UFD2P54860 YDL157CYDL157C 357 nt8.06□□□□□ -1.12
UFD2P54860 SPE4YLR146C 903 nt8.06□□□□□ -1.12
UFD2P54860 ATP10YLR393W 840 nt8.06□□□□□ -1.12
UFD2P54860 CDC23YHR166C 1881 nt8.05□□□□□ -1.12
UFD2P54860 GTS1YGL181W 1191 nt8.05□□□□□ -1.12
UFD2P54860 UBP13YBL067C 2244 nt8.05□□□□□ -1.12
UFD2P54860 MED2YDL005C 1296 nt8.04□□□□□ -1.12
UFD2P54860 OMA1YKR087C 1038 nt8.04□□□□□ -1.12
UFD2P54860 DIA1YMR316W 1011 nt8.04□□□□□ -1.12
UFD2P54860 YNR005CYNR005C 405 nt8.04□□□□□ -1.12
UFD2P54860 CLB4YLR210W 1383 nt8.04□□□□□ -1.12
UFD2P54860 snR57snR57 88 nt8.03□□□□□ -1.12
UFD2P54860 FIT2YOR382W 462 nt8.03□□□□□ -1.12
UFD2P54860 STD1YOR047C 1335 nt8.03□□□□□ -1.12
UFD2P54860 RKM4YDR257C 1485 nt8.02□□□□□ -1.13
UFD2P54860 SHO1YER118C 1104 nt8.02□□□□□ -1.13
UFD2P54860 YGR066CYGR066C 879 nt8.02□□□□□ -1.13
UFD2P54860 YHC3YJL059W 1227 nt8.02□□□□□ -1.13
UFD2P54860 CBT1YKL208W 816 nt8.02□□□□□ -1.13
UFD2P54860 CYS4YGR155W 1524 nt8.02□□□□□ -1.13
UFD2P54860 GGC1YDL198C 903 nt8.01□□□□□ -1.13
UFD2P54860 ERR1YOR393W 1314 nt8.01□□□□□ -1.13
UFD2P54860 ERR2YPL281C 1314 nt8.01□□□□□ -1.13
UFD2P54860 COX15YER141W 1461 nt8□□□□□ -1.13
UFD2P54860 YPL245WYPL245W 1365 nt8□□□□□ -1.13
UFD2P54860 YNL017CYNL017C 339 nt8□□□□□ -1.13
UFD2P54860 NTG2YOL043C 1143 nt8□□□□□ -1.13
UFD2P54860 RRP40YOL142W 723 nt8□□□□□ -1.13
UFD2P54860 HEM15YOR176W 1182 nt8□□□□□ -1.13
UFD2P54860 YPR076WYPR076W 375 nt8□□□□□ -1.13
UFD2P54860 RPN5YDL147W 1338 nt8□□□□□ -1.13
UFD2P54860 GLE1YDL207W 1617 nt8□□□□□ -1.13
UFD2P54860 SPO12YHR152W 522 nt7.99□□□□□ -1.13
UFD2P54860 MSO1YNR049C 633 nt7.99□□□□□ -1.13
UFD2P54860 VPS28YPL065W 729 nt7.99□□□□□ -1.13
UFD2P54860 YBR226CYBR226C 411 nt7.99□□□□□ -1.13
UFD2P54860 FLC2YAL053W 2352 nt7.99□□□□□ -1.13
UFD2P54860 HER2YMR293C 1395 nt7.98□□□□□ -1.13
UFD2P54860 RTN1YDR233C 888 nt7.98□□□□□ -1.13
UFD2P54860 AGX1YFL030W 1158 nt7.98□□□□□ -1.13
UFD2P54860 YOL099CYOL099C 492 nt7.98□□□□□ -1.13
UFD2P54860 MPS2YGL075C 1164 nt7.97□□□□□ -1.13
UFD2P54860 HOC1YJR075W 1191 nt7.97□□□□□ -1.13
UFD2P54860 YAL045CYAL045C 309 nt7.97□□□□□ -1.13
UFD2P54860 VTA1YLR181C 993 nt7.97□□□□□ -1.13
UFD2P54860 YMR253CYMR253C 1245 nt7.97□□□□□ -1.13
UFD2P54860 VAM3YOR106W 852 nt7.97□□□□□ -1.13
UFD2P54860 SSC1YJR045C 1965 nt7.97□□□□□ -1.13
UFD2P54860 PPH21YDL134C 1110 nt7.96□□□□□ -1.14
UFD2P54860 RRP46YGR095C 672 nt7.96□□□□□ -1.14
UFD2P54860 MHO1YJR008W 1017 nt7.96□□□□□ -1.14
UFD2P54860 LIA1YJR070C 978 nt7.96□□□□□ -1.14
UFD2P54860 NEJ1YLR265C 1029 nt7.96□□□□□ -1.14
UFD2P54860 PHO85YPL031C 918 nt7.96□□□□□ -1.14
UFD2P54860 NEM1YHR004C 1341 nt7.96□□□□□ -1.14
UFD2P54860 FCY22YER060W-A 1593 nt7.96□□□□□ -1.14
UFD2P54860 MHP1YJL042W 4197 nt7.96□□□□□ -1.14
UFD2P54860 EXG2YDR261C 1689 nt7.95□□□□□ -1.14
UFD2P54860 YLR173WYLR173W 1827 nt7.95□□□□□ -1.14
UFD2P54860 THR1YHR025W 1074 nt7.95□□□□□ -1.14
UFD2P54860 ECM2YBR065C 1095 nt7.95□□□□□ -1.14
UFD2P54860 YLL058WYLL058W 1728 nt7.95□□□□□ -1.14
UFD2P54860 CTA1YDR256C 1548 nt7.94□□□□□ -1.14
UFD2P54860 CTF3YLR381W 2202 nt7.94□□□□□ -1.14
UFD2P54860 FCY2YER056C 1602 nt7.94□□□□□ -1.14
UFD2P54860 HPT1YDR399W 666 nt7.94□□□□□ -1.14
UFD2P54860 YIP4YGL198W 708 nt7.94□□□□□ -1.14
UFD2P54860 SUN4YNL066W 1263 nt7.94□□□□□ -1.14
UFD2P54860 YHR022CYHR022C 771 nt7.93□□□□□ -1.14
UFD2P54860 YIR043CYIR043C 693 nt7.93□□□□□ -1.14
UFD2P54860 SRY1YKL218C 981 nt7.93□□□□□ -1.14
UFD2P54860 RUF21RUF21 707 nt7.93□□□□□ -1.14
UFD2P54860 DSC2YOL073C 969 nt7.93□□□□□ -1.14
UFD2P54860 ISA2YPR067W 558 nt7.93□□□□□ -1.14
UFD2P54860 ASR1YPR093C 867 nt7.93□□□□□ -1.14
UFD2P54860 MPC54YOR177C 1395 nt7.93□□□□□ -1.14
UFD2P54860 GDA1YEL042W 1557 nt7.93□□□□□ -1.14
UFD2P54860 CAN1YEL063C 1773 nt7.92□□□□□ -1.14
UFD2P54860 YDL129WYDL129W 876 nt7.92□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 41.3 ms