Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 tG(GCC)O1tG(GCC)O1 71 nt5.33□□□□□ -1.56
RPB11P38902 SUF17tG(GCC)O2 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)P1tG(GCC)P1 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)P2tG(GCC)P2 71 nt5.33□□□□□ -1.56
RPB11P38902 ADE1YAR015W 921 nt5.33□□□□□ -1.56
RPB11P38902 YNL092WYNL092W 1203 nt5.33□□□□□ -1.56
RPB11P38902 LAG2YOL025W 1983 nt5.33□□□□□ -1.56
RPB11P38902 CSC1YLR241W 2349 nt5.32□□□□□ -1.56
RPB11P38902 YDR514CYDR514C 1452 nt5.32□□□□□ -1.56
RPB11P38902 RBS1YDL189W 1374 nt5.32□□□□□ -1.56
RPB11P38902 GPI11YDR302W 660 nt5.32□□□□□ -1.56
RPB11P38902 CCP1YKR066C 1086 nt5.32□□□□□ -1.56
RPB11P38902 PET494YNR045W 1470 nt5.32□□□□□ -1.56
RPB11P38902 PDR18YNR070W 4002 nt5.32□□□□□ -1.56
RPB11P38902 HXT15YDL245C 1704 nt5.31□□□□□ -1.56
RPB11P38902 HXT16YJR158W 1704 nt5.31□□□□□ -1.56
RPB11P38902 MPE1YKL059C 1326 nt5.31□□□□□ -1.56
RPB11P38902 YDR476CYDR476C 675 nt5.31□□□□□ -1.56
RPB11P38902 NFS1YCL017C 1494 nt5.31□□□□□ -1.56
RPB11P38902 RPP1YHR062C 882 nt5.3□□□□□ -1.56
RPB11P38902 DMA1YHR115C 1251 nt5.3□□□□□ -1.56
RPB11P38902 SPG5YMR191W 1122 nt5.3□□□□□ -1.56
RPB11P38902 RPS28AYOR167C 204 nt5.3□□□□□ -1.56
RPB11P38902 ERG10YPL028W 1197 nt5.3□□□□□ -1.56
RPB11P38902 BRN1YBL097W 2265 nt5.3□□□□□ -1.56
RPB11P38902 HAS1YMR290C 1518 nt5.29□□□□□ -1.56
RPB11P38902 RMD9YGL107C 1941 nt5.29□□□□□ -1.56
RPB11P38902 MRPL1YDR116C 858 nt5.29□□□□□ -1.56
RPB11P38902 THI4YGR144W 981 nt5.29□□□□□ -1.56
RPB11P38902 CBR1YIL043C 855 nt5.29□□□□□ -1.56
RPB11P38902 FBA1YKL060C 1080 nt5.29□□□□□ -1.56
RPB11P38902 MIA40YKL195W 1212 nt5.29□□□□□ -1.56
RPB11P38902 YBL070CYBL070C 321 nt5.29□□□□□ -1.56
RPB11P38902 SLG1YOR008C 1137 nt5.29□□□□□ -1.56
RPB11P38902 AFG1YEL052W 1530 nt5.28□□□□□ -1.56
RPB11P38902 TUB1YML085C 1344 nt5.28□□□□□ -1.56
RPB11P38902 YDR387CYDR387C 1668 nt5.28□□□□□ -1.56
RPB11P38902 HXK2YGL253W 1461 nt5.28□□□□□ -1.56
RPB11P38902 VHT1YGR065C 1782 nt5.28□□□□□ -1.56
RPB11P38902 ATG22YCL038C 1587 nt5.28□□□□□ -1.56
RPB11P38902 KEL1YHR158C 3495 nt5.28□□□□□ -1.56
RPB11P38902 EDE1YBL047C 4146 nt5.27□□□□□ -1.57
RPB11P38902 MRP1YDR347W 966 nt5.27□□□□□ -1.57
RPB11P38902 PTC7YHR076W 1032 nt5.27□□□□□ -1.57
RPB11P38902 ESC8YOL017W 2145 nt5.27□□□□□ -1.57
RPB11P38902 THI2YBR240C 1353 nt5.27□□□□□ -1.57
RPB11P38902 VPS61YDR136C 573 nt5.26□□□□□ -1.57
RPB11P38902 PUP1YOR157C 786 nt5.26□□□□□ -1.57
RPB11P38902 HIS7YBR248C 1659 nt5.26□□□□□ -1.57
RPB11P38902 PXL1YKR090W 2121 nt5.26□□□□□ -1.57
RPB11P38902 PLB2YMR006C 2121 nt5.26□□□□□ -1.57
RPB11P38902 YHR020WYHR020W 2067 nt5.25□□□□□ -1.57
RPB11P38902 DOC1YGL240W 753 nt5.25□□□□□ -1.57
RPB11P38902 ATG36YJL185C 882 nt5.25□□□□□ -1.57
RPB11P38902 REC107YJR021C 945 nt5.25□□□□□ -1.57
RPB11P38902 NTG2YOL043C 1143 nt5.25□□□□□ -1.57
RPB11P38902 DFR1YOR236W 636 nt5.25□□□□□ -1.57
RPB11P38902 PPM2YOL141W 2088 nt5.24□□□□□ -1.57
RPB11P38902 SQT1YIR012W 1296 nt5.24□□□□□ -1.57
RPB11P38902 ICT1YLR099C 1185 nt5.24□□□□□ -1.57
RPB11P38902 YLR123CYLR123C 330 nt5.24□□□□□ -1.57
RPB11P38902 RPL31BYLR406C 342 nt5.24□□□□□ -1.57
RPB11P38902 ARA2YMR041C 1008 nt5.24□□□□□ -1.57
RPB11P38902 PRY3YJL078C 2646 nt5.24□□□□□ -1.57
RPB11P38902 PEX3YDR329C 1326 nt5.23□□□□□ -1.57
RPB11P38902 PYK2YOR347C 1521 nt5.23□□□□□ -1.57
RPB11P38902 HXT17YNR072W 1695 nt5.23□□□□□ -1.57
RPB11P38902 PFK2YMR205C 2880 nt5.23□□□□□ -1.57
RPB11P38902 ALT2YDR111C 1524 nt5.23□□□□□ -1.57
RPB11P38902 GET4YOR164C 939 nt5.22□□□□□ -1.57
RPB11P38902 STT3YGL022W 2157 nt5.22□□□□□ -1.57
RPB11P38902 CLB2YPR119W 1476 nt5.21□□□□□ -1.58
RPB11P38902 VTH1YIL173W 4650 nt5.21□□□□□ -1.58
RPB11P38902 VTH2YJL222W 4650 nt5.21□□□□□ -1.58
RPB11P38902 IVY1YDR229W 1362 nt5.21□□□□□ -1.58
RPB11P38902 RKI1YOR095C 777 nt5.21□□□□□ -1.58
RPB11P38902 DML1YMR211W 1428 nt5.21□□□□□ -1.58
RPB11P38902 MSY1YPL097W 1479 nt5.2□□□□□ -1.58
RPB11P38902 MRPS28YDR337W 861 nt5.2□□□□□ -1.58
RPB11P38902 FZF1YGL254W 900 nt5.2□□□□□ -1.58
RPB11P38902 FUS3YBL016W 1062 nt5.2□□□□□ -1.58
RPB11P38902 COQ3YOL096C 939 nt5.2□□□□□ -1.58
RPB11P38902 YPL250W-AYPL250W-A 288 nt5.2□□□□□ -1.58
RPB11P38902 BZZ1YHR114W 1902 nt5.2□□□□□ -1.58
RPB11P38902 VPS5YOR069W 2028 nt5.19□□□□□ -1.58
RPB11P38902 MTC5YDR128W 3447 nt5.19□□□□□ -1.58
RPB11P38902 MRS1YIR021W 1092 nt5.19□□□□□ -1.58
RPB11P38902 YHC3YJL059W 1227 nt5.19□□□□□ -1.58
RPB11P38902 AIM24YJR080C 1185 nt5.19□□□□□ -1.58
RPB11P38902 KSH1YNL024C-A 219 nt5.19□□□□□ -1.58
RPB11P38902 HTZ1YOL012C 405 nt5.19□□□□□ -1.58
RPB11P38902 TMA46YOR091W 1038 nt5.19□□□□□ -1.58
RPB11P38902 YPR123CYPR123C 435 nt5.19□□□□□ -1.58
RPB11P38902 STB5YHR178W 2232 nt5.19□□□□□ -1.58
RPB11P38902 CCC2YDR270W 3015 nt5.18□□□□□ -1.58
RPB11P38902 YLR312CYLR312C 1197 nt5.18□□□□□ -1.58
RPB11P38902 APE4YHR113W 1473 nt5.18□□□□□ -1.58
RPB11P38902 HDA1YNL021W 2121 nt5.17□□□□□ -1.58
RPB11P38902 YNL120CYNL120C 486 nt5.17□□□□□ -1.58
RPB11P38902 BSC4YNL269W 396 nt5.17□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 41.1 ms