Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SFTA3P0C7M3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SFTA3P0C7M3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.57■□□□□ 0.72
SFTA3P0C7M3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SFTA3P0C7M3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SFTA3P0C7M3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SFTA3P0C7M3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SFTA3P0C7M3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.55■□□□□ 0.72
SFTA3P0C7M3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SFTA3P0C7M3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SFTA3P0C7M3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.54■□□□□ 0.72
SFTA3P0C7M3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SFTA3P0C7M3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.54■□□□□ 0.72
SFTA3P0C7M3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SFTA3P0C7M3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SFTA3P0C7M3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SFTA3P0C7M3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SFTA3P0C7M3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SFTA3P0C7M3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SFTA3P0C7M3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SFTA3P0C7M3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SFTA3P0C7M3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SFTA3P0C7M3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.52■□□□□ 0.72
SFTA3P0C7M3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.52■□□□□ 0.72
SFTA3P0C7M3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.52■□□□□ 0.71
SFTA3P0C7M3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SFTA3P0C7M3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
SFTA3P0C7M3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SFTA3P0C7M3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SFTA3P0C7M3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SFTA3P0C7M3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTA3P0C7M3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTA3P0C7M3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTA3P0C7M3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SFTA3P0C7M3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SFTA3P0C7M3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTA3P0C7M3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTA3P0C7M3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTA3P0C7M3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTA3P0C7M3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
SFTA3P0C7M3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SFTA3P0C7M3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTA3P0C7M3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SFTA3P0C7M3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTA3P0C7M3 AC100797.4-201ENST00000631653 1827 ntBASIC19.48■□□□□ 0.71
SFTA3P0C7M3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SFTA3P0C7M3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SFTA3P0C7M3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SFTA3P0C7M3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SFTA3P0C7M3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.48■□□□□ 0.71
SFTA3P0C7M3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.48■□□□□ 0.71
SFTA3P0C7M3 AP002414.2-202ENST00000590929 1450 ntBASIC19.48■□□□□ 0.71
SFTA3P0C7M3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTA3P0C7M3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTA3P0C7M3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SFTA3P0C7M3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTA3P0C7M3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SFTA3P0C7M3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SFTA3P0C7M3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SFTA3P0C7M3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.45■□□□□ 0.7
SFTA3P0C7M3 AC138932.3-201ENST00000567634 1902 ntBASIC19.45■□□□□ 0.7
SFTA3P0C7M3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SFTA3P0C7M3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SFTA3P0C7M3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SFTA3P0C7M3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SFTA3P0C7M3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SFTA3P0C7M3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTA3P0C7M3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.44■□□□□ 0.7
SFTA3P0C7M3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTA3P0C7M3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTA3P0C7M3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTA3P0C7M3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SFTA3P0C7M3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.44■□□□□ 0.7
SFTA3P0C7M3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SFTA3P0C7M3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFTA3P0C7M3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFTA3P0C7M3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTA3P0C7M3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.42■□□□□ 0.7
SFTA3P0C7M3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTA3P0C7M3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTA3P0C7M3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SFTA3P0C7M3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTA3P0C7M3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTA3P0C7M3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFTA3P0C7M3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SFTA3P0C7M3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SFTA3P0C7M3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SFTA3P0C7M3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SFTA3P0C7M3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SFTA3P0C7M3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SFTA3P0C7M3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms