Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.2■■□□□ 1.3
PDLIM1O00151 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM1O00151 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM1O00151 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM1O00151 AC108673.1-201ENST00000510422 1159 ntBASIC23.19■■□□□ 1.3
PDLIM1O00151 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM1O00151 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM1O00151 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM1O00151 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.18■■□□□ 1.3
PDLIM1O00151 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PDLIM1O00151 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM1O00151 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM1O00151 MIR6090-201ENST00000622481 60 ntBASIC23.18■■□□□ 1.3
PDLIM1O00151 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM1O00151 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.18■■□□□ 1.3
PDLIM1O00151 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM1O00151 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM1O00151 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM1O00151 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM1O00151 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM1O00151 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM1O00151 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM1O00151 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM1O00151 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM1O00151 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM1O00151 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM1O00151 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.16■■□□□ 1.3
PDLIM1O00151 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM1O00151 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM1O00151 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
PDLIM1O00151 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.16■■□□□ 1.3
PDLIM1O00151 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM1O00151 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM1O00151 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.16■■□□□ 1.3
PDLIM1O00151 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM1O00151 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM1O00151 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM1O00151 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PDLIM1O00151 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM1O00151 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.15■■□□□ 1.3
PDLIM1O00151 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM1O00151 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDLIM1O00151 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDLIM1O00151 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDLIM1O00151 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PDLIM1O00151 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDLIM1O00151 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDLIM1O00151 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
PDLIM1O00151 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM1O00151 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.11■■□□□ 1.29
PDLIM1O00151 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM1O00151 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM1O00151 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM1O00151 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.11■■□□□ 1.29
PDLIM1O00151 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PDLIM1O00151 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM1O00151 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PDLIM1O00151 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.1■■□□□ 1.29
PDLIM1O00151 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.1■■□□□ 1.29
PDLIM1O00151 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDLIM1O00151 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PDLIM1O00151 AP004609.3-201ENST00000610705 1884 ntBASIC23.09■■□□□ 1.29
PDLIM1O00151 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.09■■□□□ 1.29
PDLIM1O00151 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDLIM1O00151 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM1O00151 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM1O00151 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM1O00151 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM1O00151 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM1O00151 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM1O00151 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.08■■□□□ 1.29
PDLIM1O00151 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDLIM1O00151 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.08■■□□□ 1.28
PDLIM1O00151 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM1O00151 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM1O00151 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM1O00151 ERN1-208ENST00000606895 2068 ntBASIC23.07■■□□□ 1.28
PDLIM1O00151 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM1O00151 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM1O00151 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM1O00151 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PDLIM1O00151 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM1O00151 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM1O00151 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM1O00151 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.05■■□□□ 1.28
PDLIM1O00151 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.05■■□□□ 1.28
PDLIM1O00151 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PDLIM1O00151 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM1O00151 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PDLIM1O00151 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PDLIM1O00151 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM1O00151 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.04■■□□□ 1.28
PDLIM1O00151 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM1O00151 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PDLIM1O00151 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM1O00151 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM1O00151 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM1O00151 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM1O00151 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM1O00151 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms