Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PHGDH-224ENST00000641711 712 nt10.82□□□□□ -0.683e-7■□□□□ 9.2
SND1Q7KZF4 PRR11-209ENST00000614081 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.688e-6■□□□□ 9.2
SND1Q7KZF4 SRP54-208ENST00000555557 1949 ntTSL 2 BASIC10.6□□□□□ -0.718e-6■□□□□ 9.2
SND1Q7KZF4 PRR11-205ENST00000580177 1641 ntTSL 1 (best)10.11□□□□□ -0.798e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-212ENST00000551779 1462 ntAPPRIS ALT1 TSL 2 BASIC10□□□□□ -0.818e-6■□□□□ 9.2
SND1Q7KZF4 SRP54-210ENST00000556380 600 ntTSL 39.96□□□□□ -0.828e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-209ENST00000550171 1026 ntTSL 29.63□□□□□ -0.878e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-208ENST00000550027 553 ntTSL 1 (best)9.51□□□□□ -0.898e-6■□□□□ 9.2
SND1Q7KZF4 SEC31A-230ENST00000510167 857 ntTSL 49.1□□□□□ -0.951e-9■□□□□ 9.2
SND1Q7KZF4 SEC31A-234ENST00000512664 710 ntTSL 39□□□□□ -0.971e-9■□□□□ 9.2
SND1Q7KZF4 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.84□□□□□ -18e-6■□□□□ 9.2
SND1Q7KZF4 SEC31A-212ENST00000503226 613 ntTSL 38.79□□□□□ -11e-9■□□□□ 9.2
SND1Q7KZF4 COPZ1-210ENST00000550713 548 ntTSL 28.71□□□□□ -1.028e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-211ENST00000551412 548 ntTSL 28.65□□□□□ -1.028e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC8.45□□□□□ -1.068e-6■□□□□ 9.2
SND1Q7KZF4 SEC31A-224ENST00000507828 1329 ntTSL 58.41□□□□□ -1.061e-9■□□□□ 9.2
SND1Q7KZF4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.118e-6■□□□□ 9.2
SND1Q7KZF4 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.47□□□□□ -1.218e-6■□□□□ 9.2
SND1Q7KZF4 SEC31A-235ENST00000512732 551 ntTSL 47.46□□□□□ -1.221e-9■□□□□ 9.2
SND1Q7KZF4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.228e-6■□□□□ 9.2
SND1Q7KZF4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.29□□□□□ -1.248e-6■□□□□ 9.2
SND1Q7KZF4 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.24□□□□□ -1.258e-6■□□□□ 9.2
SND1Q7KZF4 CTSC-205ENST00000528020 401 ntTSL 26.85□□□□□ -1.318e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.77□□□□□ -1.338e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.59□□□□□ -1.358e-6■□□□□ 9.2
SND1Q7KZF4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.87□□□□□ -1.471e-9■□□□□ 9.2
SND1Q7KZF4 ASGR1-206ENST00000573596 2083 ntTSL 518.92■□□□□ 0.624e-24■□□□□ 9.1
SND1Q7KZF4 ASGR1-205ENST00000573083 855 ntTSL 310.38□□□□□ -0.754e-24■□□□□ 9.1
SND1Q7KZF4 FSTL3-205ENST00000592058 589 ntTSL 524.51■■□□□ 1.512e-7■□□□□ 9.1
SND1Q7KZF4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.12e-7■□□□□ 9.1
SND1Q7KZF4 FSTL3-203ENST00000589185 537 ntTSL 221.81■■□□□ 1.082e-7■□□□□ 9.1
SND1Q7KZF4 NAGLU-203ENST00000590358 634 ntTSL 417.17■□□□□ 0.342e-7■□□□□ 9.1
SND1Q7KZF4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.175e-6■□□□□ 9.1
SND1Q7KZF4 CHCHD2-202ENST00000473095 694 ntTSL 1 (best)13.86□□□□□ -0.195e-6■□□□□ 9.1
SND1Q7KZF4 FRAS1-206ENST00000510944 2125 ntTSL 210.63□□□□□ -0.714e-8■□□□□ 9.1
SND1Q7KZF4 F5-203ENST00000495481 596 ntTSL 28.65□□□□□ -1.022e-7■□□□□ 9.1
SND1Q7KZF4 ITGB1-213ENST00000484088 580 ntTSL 44.23□□□□□ -1.732e-7■□□□□ 9.1
SND1Q7KZF4 MGST3-209ENST00000477450 364 ntTSL 32.64□□□□□ -1.992e-6■□□□□ 9.1
SND1Q7KZF4 SGSH-212ENST00000575188 553 ntTSL 318.85■□□□□ 0.618e-8■□□□□ 9.1
SND1Q7KZF4 ELL2-207ENST00000515020 340 ntTSL 225.46■■□□□ 1.679e-6■□□□□ 9.1
SND1Q7KZF4 ELL2-203ENST00000506628 520 ntTSL 521.31■■□□□ 19e-6■□□□□ 9.1
SND1Q7KZF4 ELL2-206ENST00000513343 582 ntTSL 321.31■■□□□ 19e-6■□□□□ 9.1
SND1Q7KZF4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.819e-6■□□□□ 9.1
SND1Q7KZF4 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 520.05■□□□□ 0.89e-6■□□□□ 9.1
SND1Q7KZF4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.139e-6■□□□□ 9.1
SND1Q7KZF4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.079e-6■□□□□ 9.1
SND1Q7KZF4 ELL2-208ENST00000635633 467 ntTSL 37.98□□□□□ -1.139e-6■□□□□ 9.1
SND1Q7KZF4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.489e-6■□□□□ 9.1
SND1Q7KZF4 SNRPB-203ENST00000474384 985 ntTSL 518.84■□□□□ 0.613e-15■□□□□ 9.1
SND1Q7KZF4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.273e-15■□□□□ 9.1
SND1Q7KZF4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.273e-15■□□□□ 9.1
SND1Q7KZF4 A2M-209ENST00000539638 590 ntTSL 46.13□□□□□ -1.432e-67■□□□□ 9.1
SND1Q7KZF4 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.98e-14■□□□□ 9.1
SND1Q7KZF4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.148e-14■□□□□ 9.1
SND1Q7KZF4 TAGLN2-204ENST00000397334 801 ntTSL 519.55■□□□□ 0.724e-10■□□□□ 9.1
SND1Q7KZF4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.02■□□□□ 0.164e-10■□□□□ 9.1
SND1Q7KZF4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.074e-10■□□□□ 9.1
SND1Q7KZF4 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.374e-10■□□□□ 9.1
SND1Q7KZF4 TAGLN2-205ENST00000478033 1051 ntTSL 212.58□□□□□ -0.44e-10■□□□□ 9.1
SND1Q7KZF4 KPNA2-207ENST00000584026 561 ntTSL 47.07□□□□□ -1.282e-12■□□□□ 9.1
SND1Q7KZF4 KPNA2-203ENST00000579754 569 ntTSL 25.67□□□□□ -1.52e-12■□□□□ 9.1
SND1Q7KZF4 KPNA2-205ENST00000583269 611 ntTSL 45.62□□□□□ -1.512e-12■□□□□ 9.1
SND1Q7KZF4 ETFA-206ENST00000559075 1735 ntTSL 222.43■■□□□ 1.182e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-201ENST00000267950 1289 ntTSL 522.28■■□□□ 1.162e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-207ENST00000559386 893 ntTSL 521.2■□□□□ 0.982e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-215ENST00000560595 917 ntTSL 1 (best)21.2■□□□□ 0.982e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.46■□□□□ 0.872e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.23■□□□□ 0.672e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-211ENST00000560044 1054 ntTSL 519.04■□□□□ 0.642e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.532e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.86■□□□□ 0.452e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-218ENST00000560899 910 ntTSL 517.86■□□□□ 0.452e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-209ENST00000559758 893 ntTSL 210.41□□□□□ -0.742e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-214ENST00000560345 717 ntTSL 48.85□□□□□ -0.992e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-217ENST00000560816 412 ntTSL 37.96□□□□□ -1.142e-6■□□□□ 9.1
SND1Q7KZF4 ETFA-210ENST00000559973 804 ntTSL 37.94□□□□□ -1.142e-6■□□□□ 9.1
SND1Q7KZF4 ESD-204ENST00000471867 2410 ntTSL 25.01□□□□□ -1.614e-9■□□□□ 9.1
SND1Q7KZF4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.59■□□□□ 0.253e-6■□□□□ 9.1
SND1Q7KZF4 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.223e-6■□□□□ 9.1
SND1Q7KZF4 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.233e-6■□□□□ 9.1
SND1Q7KZF4 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.86□□□□□ -0.993e-6■□□□□ 9.1
SND1Q7KZF4 HSPA8-214ENST00000531063 578 ntTSL 24.89□□□□□ -1.633e-21■□□□□ 9
SND1Q7KZF4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.23■□□□□ 0.354e-7■□□□□ 9
SND1Q7KZF4 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC12.87□□□□□ -0.353e-12■□□□□ 9
SND1Q7KZF4 MTHFD2-201ENST00000394053 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.553e-12■□□□□ 9
SND1Q7KZF4 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC10.01□□□□□ -0.813e-12■□□□□ 9
SND1Q7KZF4 ARG2-203ENST00000557120 836 ntTSL 29.37□□□□□ -0.914e-7■□□□□ 9
SND1Q7KZF4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.78□□□□□ -1.164e-7■□□□□ 9
SND1Q7KZF4 CPOX-202ENST00000510489 526 ntTSL 26.92□□□□□ -1.34e-7■□□□□ 9
SND1Q7KZF4 ARG2-202ENST00000556491 457 ntTSL 56.23□□□□□ -1.414e-7■□□□□ 9
SND1Q7KZF4 COPE-206ENST00000597026 678 ntTSL 216.53■□□□□ 0.242e-9■□□□□ 9
SND1Q7KZF4 MCM3-204ENST00000476448 982 ntTSL 214.44□□□□□ -0.19e-7■□□□□ 9
SND1Q7KZF4 AC002985.1-202ENST00000593484 584 ntAPPRIS P1 TSL 514.18□□□□□ -0.142e-9■□□□□ 9
SND1Q7KZF4 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.182e-9■□□□□ 9
SND1Q7KZF4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.682e-7■□□□□ 9
SND1Q7KZF4 IGFBP2-205ENST00000490362 4414 ntTSL 218.67■□□□□ 0.582e-7■□□□□ 9
SND1Q7KZF4 ANGPTL4-208ENST00000598255 909 ntTSL 217.1■□□□□ 0.332e-7■□□□□ 9
SND1Q7KZF4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.6■□□□□ 0.252e-7■□□□□ 9
SND1Q7KZF4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.163e-40■□□□□ 9
SND1Q7KZF4 ANGPTL4-204ENST00000594348 1021 ntTSL 215.57■□□□□ 0.082e-7■□□□□ 9
Retrieved 100 of 13,567 protein–RNA pairs in 268.6 ms