RNA–Protein interactions for RNA: ENST00000560899.5

ETFA-218, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-218ENST00000560899 NISCHQ9Y2I1 1504 aa42.26■■■■■ 4.36
ETFA-218ENST00000560899 CCDC180Q9P1Z9 1646 aa37.73■■■■□ 3.63
ETFA-218ENST00000560899 ABCC9O60706 1549 aa36.72■■■■□ 3.47
ETFA-218ENST00000560899 RB1CC1Q8TDY2 1594 aa35.46■■■■□ 3.27
ETFA-218ENST00000560899 NACADO15069 1562 aa35.42■■■■□ 3.26
ETFA-218ENST00000560899 MYO15BQ96JP2 1530 aa35.28■■■■□ 3.24
ETFA-218ENST00000560899 ZCCHC6Q5VYS8 1495 aaKnown RBP35.23■■■■□ 3.23
ETFA-218ENST00000560899 DCAF1Q9Y4B6 1507 aa35.08■■■■□ 3.21
ETFA-218ENST00000560899 DCAF8L2P0C7V8 631 aa35.01■■■■□ 3.2
ETFA-218ENST00000560899 UNC13AQ9UPW8 1703 aa34.68■■■■□ 3.14
ETFA-218ENST00000560899 BICRAQ9NZM4 1560 aa34.37■■■■□ 3.09
ETFA-218ENST00000560899 SCRIBQ14160 1630 aa34.24■■■■□ 3.07
ETFA-218ENST00000560899 PABPN1Q86U42 306 aaKnown RBP eCLIP34.2■■■■□ 3.07
ETFA-218ENST00000560899 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
ETFA-218ENST00000560899 DNAJC5BQ9UF47 199 aa33.68■■■□□ 2.98
ETFA-218ENST00000560899 EIF4G1Q04637 1599 aaKnown RBP33.46■■■□□ 2.95
ETFA-218ENST00000560899 CC2D2AQ9P2K1 1620 aa33.31■■■□□ 2.92
ETFA-218ENST00000560899 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
ETFA-218ENST00000560899 SMARCA4P51532 1647 aa32.83■■■□□ 2.85
ETFA-218ENST00000560899 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
ETFA-218ENST00000560899 NCAPD3P42695 1498 aa32.65■■■□□ 2.82
ETFA-218ENST00000560899 SMARCA2P51531 1590 aa32.65■■■□□ 2.82
ETFA-218ENST00000560899 ATAD2BQ9ULI0 1458 aa32.62■■■□□ 2.81
ETFA-218ENST00000560899 PEG3Q9GZU2 1588 aa32.59■■■□□ 2.81
ETFA-218ENST00000560899 HMGXB3Q12766 1538 aa32.55■■■□□ 2.8
ETFA-218ENST00000560899 MROH2BQ7Z745 1585 aa32.52■■■□□ 2.8
ETFA-218ENST00000560899 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
ETFA-218ENST00000560899 WIZO95785 1651 aa32.17■■■□□ 2.74
ETFA-218ENST00000560899 RSF1Q96T23 1441 aaPredicted RBP32.12■■■□□ 2.73
ETFA-218ENST00000560899 TOP2AP11388 1531 aaKnown RBP31.89■■■□□ 2.7
ETFA-218ENST00000560899 LAMC3Q9Y6N6 1575 aa31.84■■■□□ 2.69
ETFA-218ENST00000560899 NESP48681 1621 aa31.77■■■□□ 2.68
ETFA-218ENST00000560899 ERCC6Q03468 1493 aa31.69■■■□□ 2.66
ETFA-218ENST00000560899 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
ETFA-218ENST00000560899 PDS5BQ9NTI5 1447 aa31.55■■■□□ 2.64
ETFA-218ENST00000560899 KIF21AQ7Z4S6 1674 aa31.5■■■□□ 2.63
ETFA-218ENST00000560899 CUX2O14529 1486 aa31.49■■■□□ 2.63
ETFA-218ENST00000560899 CFTRP13569 1480 aa31.49■■■□□ 2.63
ETFA-218ENST00000560899 THOC2Q8NI27 1593 aaKnown RBP31.44■■■□□ 2.62
ETFA-218ENST00000560899 CCDC88BA6NC98 1476 aa31.43■■■□□ 2.62
ETFA-218ENST00000560899 PRDM2Q13029 1718 aa31.38■■■□□ 2.61
ETFA-218ENST00000560899 FANCD2Q9BXW9 1451 aa31.28■■■□□ 2.6
ETFA-218ENST00000560899 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
ETFA-218ENST00000560899 MRC2Q9UBG0 1479 aa31.24■■■□□ 2.59
ETFA-218ENST00000560899 WDR62O43379 1518 aa31.19■■■□□ 2.58
ETFA-218ENST00000560899 SUPT5HO00267 1087 aaKnown RBP31.04■■■□□ 2.56
ETFA-218ENST00000560899 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
ETFA-218ENST00000560899 ABCC8Q09428 1581 aa30.85■■■□□ 2.53
ETFA-218ENST00000560899 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
ETFA-218ENST00000560899 TOPBP1Q92547 1522 aa30.79■■■□□ 2.52
ETFA-218ENST00000560899 IFT140Q96RY7 1462 aa30.63■■■□□ 2.49
ETFA-218ENST00000560899 CUX1P39880 1505 aa30.53■■■□□ 2.48
ETFA-218ENST00000560899 POLA1P09884 1462 aaPredicted RBP30.52■■■□□ 2.48
ETFA-218ENST00000560899 TARBP1Q13395 1621 aaKnown RBP30.51■■■□□ 2.47
ETFA-218ENST00000560899 DNAJC5Q9H3Z4 198 aa30.46■■■□□ 2.47
ETFA-218ENST00000560899 FGD5Q6ZNL6 1462 aa30.42■■■□□ 2.46
ETFA-218ENST00000560899 ZNF608Q9ULD9 1512 aaPredicted RBP30.42■■■□□ 2.46
ETFA-218ENST00000560899 EIF4G3O43432 1585 aaKnown RBP30.4■■■□□ 2.46
ETFA-218ENST00000560899 WDR97A6NE52 1622 aa30.37■■■□□ 2.45
ETFA-218ENST00000560899 SOGA1O94964 1423 aa30.34■■■□□ 2.45
ETFA-218ENST00000560899 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
ETFA-218ENST00000560899 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
ETFA-218ENST00000560899 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
ETFA-218ENST00000560899 WRNQ14191 1432 aaPredicted RBP eCLIP30.3■■■□□ 2.44
ETFA-218ENST00000560899 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
ETFA-218ENST00000560899 AQRO60306 1485 aaKnown RBP eCLIP30.2■■■□□ 2.434e-6■□□□□ 10.1
ETFA-218ENST00000560899 ABCA10Q8WWZ4 1543 aa30.18■■■□□ 2.42
ETFA-218ENST00000560899 TDRD9Q8NDG6 1382 aaKnown RBP30.12■■■□□ 2.41
ETFA-218ENST00000560899 ABCA5Q8WWZ7 1642 aa30.1■■■□□ 2.41
ETFA-218ENST00000560899 GRIN2BQ13224 1484 aa30.06■■■□□ 2.4
ETFA-218ENST00000560899 PBRM1Q86U86 1689 aa30.04■■■□□ 2.4
ETFA-218ENST00000560899 GAPVD1Q14C86 1478 aa30.03■■■□□ 2.4
ETFA-218ENST00000560899 MAGI1Q96QZ7 1491 aaPredicted RBP30.03■■■□□ 2.4
ETFA-218ENST00000560899 OSCARQ8IYS5 282 aa30.02■■■□□ 2.4
ETFA-218ENST00000560899 CHD1O14646 1710 aa30.02■■■□□ 2.4
ETFA-218ENST00000560899 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
ETFA-218ENST00000560899 SYNJ2O15056 1496 aa29.88■■■□□ 2.37
ETFA-218ENST00000560899 ERICH3Q5RHP9 1530 aa29.85■■■□□ 2.37
ETFA-218ENST00000560899 ADAMTS12P58397 1594 aa29.8■■■□□ 2.36
ETFA-218ENST00000560899 FBLN2P98095 1184 aa29.74■■■□□ 2.35
ETFA-218ENST00000560899 CHMP7Q8WUX9 453 aaPredicted RBP29.73■■■□□ 2.35
ETFA-218ENST00000560899 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
ETFA-218ENST00000560899 FHAD1B1AJZ9 1412 aa29.7■■■□□ 2.34
ETFA-218ENST00000560899 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
ETFA-218ENST00000560899 KIF27Q86VH2 1401 aa29.67■■■□□ 2.34
ETFA-218ENST00000560899 RIMBP3CA6NJZ7 1639 aa29.64■■■□□ 2.34
ETFA-218ENST00000560899 RIMBP3BA6NNM3 1639 aa29.64■■■□□ 2.34
ETFA-218ENST00000560899 RIMBP3Q9UFD9 1639 aa29.64■■■□□ 2.34
ETFA-218ENST00000560899 ARHGEF11O15085 1522 aa29.63■■■□□ 2.33
ETFA-218ENST00000560899 CUL7Q14999 1698 aa29.59■■■□□ 2.33
ETFA-218ENST00000560899 NUP160Q12769 1436 aa29.57■■■□□ 2.32
ETFA-218ENST00000560899 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
ETFA-218ENST00000560899 IGF1RP08069 1367 aa29.52■■■□□ 2.32
ETFA-218ENST00000560899 SHROOM2Q13796 1616 aa29.41■■■□□ 2.3
ETFA-218ENST00000560899 TRIM41Q8WV44 630 aa29.4■■■□□ 2.3
ETFA-218ENST00000560899 ARAP1Q96P48 1450 aa29.38■■■□□ 2.29
ETFA-218ENST00000560899 RUSC2Q8N2Y8 1516 aa29.37■■■□□ 2.29
ETFA-218ENST00000560899 CARMIL1Q5VZK9 1371 aa29.34■■■□□ 2.29
ETFA-218ENST00000560899 KIAA0586Q9BVV6 1533 aa29.25■■■□□ 2.27
ETFA-218ENST00000560899 RAPGEF2Q9Y4G8 1499 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms