RNA–Protein interactions for RNA: ENST00000559758.5

ETFA-209, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 2

Gene ETFA, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-209ENST00000559758 AEBP2Q6ZN18 517 aaPredicted RBP27.7■■■□□ 2.02
ETFA-209ENST00000559758 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
ETFA-209ENST00000559758 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
ETFA-209ENST00000559758 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
ETFA-209ENST00000559758 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
ETFA-209ENST00000559758 FOXD1Q16676 465 aa21.72■■□□□ 1.07
ETFA-209ENST00000559758 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
ETFA-209ENST00000559758 ADRA2BP18089 450 aa21.09■□□□□ 0.97
ETFA-209ENST00000559758 PIAS4Q8N2W9 510 aaPredicted RBP20.52■□□□□ 0.88
ETFA-209ENST00000559758 MSH5O43196 834 aa19.9■□□□□ 0.78
ETFA-209ENST00000559758 PPP4R3CPQ6ZMV5 832 aa19.66■□□□□ 0.74
ETFA-209ENST00000559758 KCNA4P22459 653 aa19.53■□□□□ 0.72
ETFA-209ENST00000559758 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
ETFA-209ENST00000559758 NCBP3Q53F19 620 aaKnown RBP19.19■□□□□ 0.66
ETFA-209ENST00000559758 CNKSR2Q8WXI2 1034 aa19.06■□□□□ 0.64
ETFA-209ENST00000559758 MAPK8IP2Q13387 824 aaPredicted RBP19.05■□□□□ 0.64
ETFA-209ENST00000559758 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
ETFA-209ENST00000559758 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
ETFA-209ENST00000559758 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
ETFA-209ENST00000559758 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
ETFA-209ENST00000559758 HOXD11P31277 338 aaPredicted RBP18.5■□□□□ 0.55
ETFA-209ENST00000559758 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
ETFA-209ENST00000559758 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
ETFA-209ENST00000559758 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
ETFA-209ENST00000559758 ZBTB22O15209 634 aa18.01■□□□□ 0.47
ETFA-209ENST00000559758 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
ETFA-209ENST00000559758 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
ETFA-209ENST00000559758 POTEDQ86YR6 584 aa17.83■□□□□ 0.44
ETFA-209ENST00000559758 DCAF8L1A6NGE4 600 aa17.82■□□□□ 0.44
ETFA-209ENST00000559758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
ETFA-209ENST00000559758 MYCNP04198 464 aaPredicted RBP17.51■□□□□ 0.39
ETFA-209ENST00000559758 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
ETFA-209ENST00000559758 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
ETFA-209ENST00000559758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
ETFA-209ENST00000559758 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
ETFA-209ENST00000559758 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
ETFA-209ENST00000559758 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
ETFA-209ENST00000559758 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
ETFA-209ENST00000559758 APLP2Q06481 763 aa16.93■□□□□ 0.3
ETFA-209ENST00000559758 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
ETFA-209ENST00000559758 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
ETFA-209ENST00000559758 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
ETFA-209ENST00000559758 CAPN15O75808 1086 aa16.64■□□□□ 0.25
ETFA-209ENST00000559758 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
ETFA-209ENST00000559758 POLA2Q14181 598 aa16.44■□□□□ 0.22
ETFA-209ENST00000559758 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
ETFA-209ENST00000559758 ABCB7O75027 752 aa16.37■□□□□ 0.21
ETFA-209ENST00000559758 DSG3P32926 999 aa16.36■□□□□ 0.21
ETFA-209ENST00000559758 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
ETFA-209ENST00000559758 FKBP8Q14318 412 aa16.32■□□□□ 0.2
ETFA-209ENST00000559758 FBLN2P98095 1184 aa16.24■□□□□ 0.19
ETFA-209ENST00000559758 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
ETFA-209ENST00000559758 SPDYE4A6NLX3 237 aa16.04■□□□□ 0.16
ETFA-209ENST00000559758 PROM2Q8N271 834 aa15.91■□□□□ 0.14
ETFA-209ENST00000559758 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
ETFA-209ENST00000559758 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
ETFA-209ENST00000559758 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
ETFA-209ENST00000559758 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
ETFA-209ENST00000559758 SSUH2Q9Y2M2 353 aa15.76■□□□□ 0.11
ETFA-209ENST00000559758 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
ETFA-209ENST00000559758 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
ETFA-209ENST00000559758 AMER1Q5JTC6 1135 aaPredicted RBP15.61■□□□□ 0.09
ETFA-209ENST00000559758 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
ETFA-209ENST00000559758 RTN4Q9NQC3 1192 aaKnown RBP15.57■□□□□ 0.08
ETFA-209ENST00000559758 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
ETFA-209ENST00000559758 VASPP50552 380 aaPredicted RBP15.46■□□□□ 0.07
ETFA-209ENST00000559758 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
ETFA-209ENST00000559758 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
ETFA-209ENST00000559758 IFNLR1Q8IU57 520 aaPredicted RBP15.28■□□□□ 0.04
ETFA-209ENST00000559758 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
ETFA-209ENST00000559758 SPDYE1Q8NFV5 336 aaPredicted RBP15.26■□□□□ 0.03
ETFA-209ENST00000559758 PLCD3Q8N3E9 789 aa15.15■□□□□ 0.02
ETFA-209ENST00000559758 MIER1Q8N108 512 aa15.13■□□□□ 0.01
ETFA-209ENST00000559758 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
ETFA-209ENST00000559758 PITPNM1O00562 1244 aa15.12■□□□□ 0.01
ETFA-209ENST00000559758 PRR29P0C7W0 189 aa15.05■□□□□ -0
ETFA-209ENST00000559758 KLHL34Q8N239 644 aa15.05■□□□□ -0
ETFA-209ENST00000559758 SLC24A1O60721 1099 aa15.04■□□□□ -0
ETFA-209ENST00000559758 SPOCK2Q92563 424 aa15.03■□□□□ -0
ETFA-209ENST00000559758 PLEKHG5O94827 1062 aa15.02■□□□□ -0
ETFA-209ENST00000559758 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
ETFA-209ENST00000559758 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
ETFA-209ENST00000559758 MNX1P50219 401 aaPredicted RBP14.9□□□□□ -0.02
ETFA-209ENST00000559758 PKD2Q13563 968 aa14.89□□□□□ -0.03
ETFA-209ENST00000559758 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
ETFA-209ENST00000559758 FXR2P51116 673 aaKnown RBP eCLIP14.8□□□□□ -0.041e-7■□□□□ 8.6
ETFA-209ENST00000559758 NUBP1P53384 320 aa14.8□□□□□ -0.04
ETFA-209ENST00000559758 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
ETFA-209ENST00000559758 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
ETFA-209ENST00000559758 DCAF8L2P0C7V8 631 aa14.73□□□□□ -0.05
ETFA-209ENST00000559758 PRKAR2AP13861 404 aaKnown RBP14.71□□□□□ -0.05
ETFA-209ENST00000559758 CIZ1Q9ULV3 898 aaPredicted RBP14.7□□□□□ -0.06
ETFA-209ENST00000559758 ECM2O94769 699 aaPredicted RBP14.69□□□□□ -0.06
ETFA-209ENST00000559758 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
ETFA-209ENST00000559758 PIP4P2Q8N4L2 257 aa14.69□□□□□ -0.06
ETFA-209ENST00000559758 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
ETFA-209ENST00000559758 GSE1Q14687 1217 aa14.66□□□□□ -0.06
ETFA-209ENST00000559758 RASEFQ8IZ41 740 aa14.66□□□□□ -0.06
ETFA-209ENST00000559758 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
ETFA-209ENST00000559758 FAM212AQ96EL1 285 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms