RNA–Protein interactions for RNA: ENST00000560345.5

ETFA-214, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 4

Gene ETFA, Length 717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-214ENST00000560345 NISCHQ9Y2I1 1504 aa21.26■□□□□ 0.99
ETFA-214ENST00000560345 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
ETFA-214ENST00000560345 ABCC9O60706 1549 aa18.59■□□□□ 0.57
ETFA-214ENST00000560345 RB1CC1Q8TDY2 1594 aa17.82■□□□□ 0.44
ETFA-214ENST00000560345 NACADO15069 1562 aa17.77■□□□□ 0.44
ETFA-214ENST00000560345 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
ETFA-214ENST00000560345 DCAF8L2P0C7V8 631 aa17.7■□□□□ 0.42
ETFA-214ENST00000560345 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
ETFA-214ENST00000560345 UNC13AQ9UPW8 1703 aa17.59■□□□□ 0.41
ETFA-214ENST00000560345 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
ETFA-214ENST00000560345 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
ETFA-214ENST00000560345 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
ETFA-214ENST00000560345 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
ETFA-214ENST00000560345 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
ETFA-214ENST00000560345 SHROOM4Q9ULL8 1493 aa17.03■□□□□ 0.32
ETFA-214ENST00000560345 EIF4G1Q04637 1599 aaKnown RBP16.88■□□□□ 0.29
ETFA-214ENST00000560345 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
ETFA-214ENST00000560345 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
ETFA-214ENST00000560345 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
ETFA-214ENST00000560345 BAZ1AQ9NRL2 1556 aaPredicted RBP16.46■□□□□ 0.23
ETFA-214ENST00000560345 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
ETFA-214ENST00000560345 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
ETFA-214ENST00000560345 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
ETFA-214ENST00000560345 SMARCA2P51531 1590 aa16.37■□□□□ 0.21
ETFA-214ENST00000560345 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
ETFA-214ENST00000560345 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
ETFA-214ENST00000560345 WIZO95785 1651 aa16.29■□□□□ 0.2
ETFA-214ENST00000560345 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
ETFA-214ENST00000560345 RSF1Q96T23 1441 aaPredicted RBP16.18■□□□□ 0.18
ETFA-214ENST00000560345 NESP48681 1621 aa16.12■□□□□ 0.17
ETFA-214ENST00000560345 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
ETFA-214ENST00000560345 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
ETFA-214ENST00000560345 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
ETFA-214ENST00000560345 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
ETFA-214ENST00000560345 THOC2Q8NI27 1593 aaKnown RBP15.9■□□□□ 0.14
ETFA-214ENST00000560345 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
ETFA-214ENST00000560345 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
ETFA-214ENST00000560345 CFTRP13569 1480 aa15.83■□□□□ 0.12
ETFA-214ENST00000560345 CUX2O14529 1486 aa15.81■□□□□ 0.12
ETFA-214ENST00000560345 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
ETFA-214ENST00000560345 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
ETFA-214ENST00000560345 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
ETFA-214ENST00000560345 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
ETFA-214ENST00000560345 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
ETFA-214ENST00000560345 WDR62O43379 1518 aa15.71■□□□□ 0.11
ETFA-214ENST00000560345 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
ETFA-214ENST00000560345 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
ETFA-214ENST00000560345 TOPBP1Q92547 1522 aa15.52■□□□□ 0.07
ETFA-214ENST00000560345 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
ETFA-214ENST00000560345 CUX1P39880 1505 aa15.42■□□□□ 0.06
ETFA-214ENST00000560345 ZNF608Q9ULD9 1512 aaPredicted RBP15.41■□□□□ 0.06
ETFA-214ENST00000560345 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
ETFA-214ENST00000560345 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
ETFA-214ENST00000560345 POLA1P09884 1462 aaPredicted RBP15.39■□□□□ 0.05
ETFA-214ENST00000560345 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
ETFA-214ENST00000560345 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
ETFA-214ENST00000560345 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
ETFA-214ENST00000560345 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
ETFA-214ENST00000560345 RAD54L2Q9Y4B4 1467 aa15.34■□□□□ 0.05
ETFA-214ENST00000560345 WDR97A6NE52 1622 aa15.3■□□□□ 0.04
ETFA-214ENST00000560345 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
ETFA-214ENST00000560345 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.042e-7■□□□□ 10.3
ETFA-214ENST00000560345 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
ETFA-214ENST00000560345 SOGA1O94964 1423 aa15.26■□□□□ 0.03
ETFA-214ENST00000560345 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
ETFA-214ENST00000560345 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
ETFA-214ENST00000560345 TDRD9Q8NDG6 1382 aaKnown RBP15.22■□□□□ 0.03
ETFA-214ENST00000560345 CHD1O14646 1710 aa15.21■□□□□ 0.03
ETFA-214ENST00000560345 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
ETFA-214ENST00000560345 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
ETFA-214ENST00000560345 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
ETFA-214ENST00000560345 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
ETFA-214ENST00000560345 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
ETFA-214ENST00000560345 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
ETFA-214ENST00000560345 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
ETFA-214ENST00000560345 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
ETFA-214ENST00000560345 FBLN2P98095 1184 aa15.02■□□□□ -0
ETFA-214ENST00000560345 ADAMTS12P58397 1594 aa15.02□□□□□ -0.01
ETFA-214ENST00000560345 SYNJ2O15056 1496 aa15.01□□□□□ -0.01
ETFA-214ENST00000560345 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
ETFA-214ENST00000560345 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
ETFA-214ENST00000560345 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
ETFA-214ENST00000560345 CLASP1Q7Z460 1538 aa14.99□□□□□ -0.01
ETFA-214ENST00000560345 ARHGEF11O15085 1522 aa14.97□□□□□ -0.01
ETFA-214ENST00000560345 ERICH3Q5RHP9 1530 aa14.97□□□□□ -0.01
ETFA-214ENST00000560345 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
ETFA-214ENST00000560345 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
ETFA-214ENST00000560345 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
ETFA-214ENST00000560345 FHAD1B1AJZ9 1412 aa14.9□□□□□ -0.02
ETFA-214ENST00000560345 TRIM41Q8WV44 630 aa14.88□□□□□ -0.03
ETFA-214ENST00000560345 NUP160Q12769 1436 aa14.87□□□□□ -0.03
ETFA-214ENST00000560345 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
ETFA-214ENST00000560345 ARAP1Q96P48 1450 aa14.86□□□□□ -0.03
ETFA-214ENST00000560345 RUSC2Q8N2Y8 1516 aa14.86□□□□□ -0.03
ETFA-214ENST00000560345 IGF1RP08069 1367 aa14.85□□□□□ -0.03
ETFA-214ENST00000560345 CUL7Q14999 1698 aa14.84□□□□□ -0.03
ETFA-214ENST00000560345 ERCC6L2Q5T890 1561 aa14.84□□□□□ -0.03
ETFA-214ENST00000560345 SHROOM2Q13796 1616 aa14.81□□□□□ -0.04
ETFA-214ENST00000560345 CYB5RLQ6IPT4 315 aa14.76□□□□□ -0.05
ETFA-214ENST00000560345 CARMIL1Q5VZK9 1371 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms