RNA–Protein interactions for RNA: ENST00000550027.5

COPZ1-208, Transcript of coatomer protein complex subunit zeta 1, humanhuman

TSL 1 (best)

Gene COPZ1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPZ1-208ENST00000550027 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
COPZ1-208ENST00000550027 ABCC9O60706 1549 aa22.16■■□□□ 1.14
COPZ1-208ENST00000550027 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
COPZ1-208ENST00000550027 DNAJC5BQ9UF47 199 aa21.33■■□□□ 1.01
COPZ1-208ENST00000550027 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
COPZ1-208ENST00000550027 NACADO15069 1562 aa20.63■□□□□ 0.89
COPZ1-208ENST00000550027 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
COPZ1-208ENST00000550027 DNAJC5Q9H3Z4 198 aa20.31■□□□□ 0.84
COPZ1-208ENST00000550027 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.84
COPZ1-208ENST00000550027 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
COPZ1-208ENST00000550027 MYO15BQ96JP2 1530 aa20.18■□□□□ 0.82
COPZ1-208ENST00000550027 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
COPZ1-208ENST00000550027 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
COPZ1-208ENST00000550027 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
COPZ1-208ENST00000550027 CC2D2AQ9P2K1 1620 aa20.02■□□□□ 0.8
COPZ1-208ENST00000550027 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
COPZ1-208ENST00000550027 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
COPZ1-208ENST00000550027 CUX2O14529 1486 aa19.59■□□□□ 0.73
COPZ1-208ENST00000550027 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
COPZ1-208ENST00000550027 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
COPZ1-208ENST00000550027 ERCC6Q03468 1493 aa19.29■□□□□ 0.68
COPZ1-208ENST00000550027 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
COPZ1-208ENST00000550027 TRIM41Q8WV44 630 aa19■□□□□ 0.63
COPZ1-208ENST00000550027 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
COPZ1-208ENST00000550027 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
COPZ1-208ENST00000550027 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
COPZ1-208ENST00000550027 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
COPZ1-208ENST00000550027 NESP48681 1621 aa18.78■□□□□ 0.6
COPZ1-208ENST00000550027 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
COPZ1-208ENST00000550027 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
COPZ1-208ENST00000550027 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
COPZ1-208ENST00000550027 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
COPZ1-208ENST00000550027 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
COPZ1-208ENST00000550027 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
COPZ1-208ENST00000550027 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
COPZ1-208ENST00000550027 PEG3Q9GZU2 1588 aa18.5■□□□□ 0.55
COPZ1-208ENST00000550027 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
COPZ1-208ENST00000550027 WDR62O43379 1518 aa18.47■□□□□ 0.55
COPZ1-208ENST00000550027 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
COPZ1-208ENST00000550027 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
COPZ1-208ENST00000550027 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.51
COPZ1-208ENST00000550027 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.51
COPZ1-208ENST00000550027 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.51
COPZ1-208ENST00000550027 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
COPZ1-208ENST00000550027 ARHGEF11O15085 1522 aa18.17■□□□□ 0.5
COPZ1-208ENST00000550027 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
COPZ1-208ENST00000550027 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
COPZ1-208ENST00000550027 TRHP20396 242 aaPredicted RBP18.09■□□□□ 0.49
COPZ1-208ENST00000550027 CFTRP13569 1480 aa18.02■□□□□ 0.48
COPZ1-208ENST00000550027 CYB5RLQ6IPT4 315 aa18.02■□□□□ 0.48
COPZ1-208ENST00000550027 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
COPZ1-208ENST00000550027 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
COPZ1-208ENST00000550027 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
COPZ1-208ENST00000550027 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
COPZ1-208ENST00000550027 ZNF608Q9ULD9 1512 aaPredicted RBP17.85■□□□□ 0.45
COPZ1-208ENST00000550027 WIZO95785 1651 aa17.83■□□□□ 0.45
COPZ1-208ENST00000550027 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
COPZ1-208ENST00000550027 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
COPZ1-208ENST00000550027 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
COPZ1-208ENST00000550027 CHD1O14646 1710 aa17.75■□□□□ 0.43
COPZ1-208ENST00000550027 TOPBP1Q92547 1522 aa17.71■□□□□ 0.43
COPZ1-208ENST00000550027 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
COPZ1-208ENST00000550027 FBLN2P98095 1184 aa17.66■□□□□ 0.42
COPZ1-208ENST00000550027 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
COPZ1-208ENST00000550027 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.413e-7■■■■■ 28.6
COPZ1-208ENST00000550027 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
COPZ1-208ENST00000550027 CLASP1Q7Z460 1538 aa17.59■□□□□ 0.41
COPZ1-208ENST00000550027 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
COPZ1-208ENST00000550027 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
COPZ1-208ENST00000550027 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
COPZ1-208ENST00000550027 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
COPZ1-208ENST00000550027 POLA1P09884 1462 aaPredicted RBP17.48■□□□□ 0.39
COPZ1-208ENST00000550027 GAPVD1Q14C86 1478 aa17.47■□□□□ 0.39
COPZ1-208ENST00000550027 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
COPZ1-208ENST00000550027 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
COPZ1-208ENST00000550027 SYNJ2O15056 1496 aa17.42■□□□□ 0.38
COPZ1-208ENST00000550027 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
COPZ1-208ENST00000550027 SOGA1O94964 1423 aa17.39■□□□□ 0.38
COPZ1-208ENST00000550027 ILDR1Q86SU0 546 aaPredicted RBP17.39■□□□□ 0.37
COPZ1-208ENST00000550027 GRIN2BQ13224 1484 aa17.38■□□□□ 0.37
COPZ1-208ENST00000550027 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
COPZ1-208ENST00000550027 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
COPZ1-208ENST00000550027 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
COPZ1-208ENST00000550027 PBRM1Q86U86 1689 aa17.18■□□□□ 0.34
COPZ1-208ENST00000550027 KDM4FA0A1W2PPD8 638 aa17.15■□□□□ 0.34
COPZ1-208ENST00000550027 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
COPZ1-208ENST00000550027 ABCC10Q5T3U5 1492 aa17.13■□□□□ 0.33
COPZ1-208ENST00000550027 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
COPZ1-208ENST00000550027 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
COPZ1-208ENST00000550027 NUP160Q12769 1436 aa17.12■□□□□ 0.33
COPZ1-208ENST00000550027 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
COPZ1-208ENST00000550027 KDM6BO15054 1643 aa17.1■□□□□ 0.33
COPZ1-208ENST00000550027 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
COPZ1-208ENST00000550027 CUX1P39880 1505 aa17.09■□□□□ 0.33
COPZ1-208ENST00000550027 ABCA5Q8WWZ7 1642 aa17.08■□□□□ 0.32
COPZ1-208ENST00000550027 MAPKBP1O60336 1514 aa17.08■□□□□ 0.32
COPZ1-208ENST00000550027 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.32
COPZ1-208ENST00000550027 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
COPZ1-208ENST00000550027 DIP2BQ9P265 1576 aa17.02■□□□□ 0.32
COPZ1-208ENST00000550027 ADAMTS12P58397 1594 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms