RNA–Protein interactions for RNA: ENST00000560595.5

ETFA-215, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 1 (best)

Gene ETFA, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-215ENST00000560595 NISCHQ9Y2I1 1504 aa49.6■■■■■ 5.53
ETFA-215ENST00000560595 CCDC180Q9P1Z9 1646 aa44.1■■■■■ 4.65
ETFA-215ENST00000560595 ABCC9O60706 1549 aa42.95■■■■■ 4.47
ETFA-215ENST00000560595 RB1CC1Q8TDY2 1594 aa41.39■■■■■ 4.22
ETFA-215ENST00000560595 ZCCHC6Q5VYS8 1495 aaKnown RBP41.37■■■■■ 4.21
ETFA-215ENST00000560595 NACADO15069 1562 aa41.37■■■■■ 4.21
ETFA-215ENST00000560595 DCAF8L2P0C7V8 631 aa41.28■■■■■ 4.2
ETFA-215ENST00000560595 MYO15BQ96JP2 1530 aa41.14■■■■■ 4.18
ETFA-215ENST00000560595 DCAF1Q9Y4B6 1507 aa41.04■■■■■ 4.16
ETFA-215ENST00000560595 UNC13AQ9UPW8 1703 aa40.6■■■■■ 4.09
ETFA-215ENST00000560595 SCRIBQ14160 1630 aa40.26■■■■■ 4.04
ETFA-215ENST00000560595 BICRAQ9NZM4 1560 aa40.18■■■■■ 4.02
ETFA-215ENST00000560595 PABPN1Q86U42 306 aaKnown RBP eCLIP40.11■■■■■ 4.01
ETFA-215ENST00000560595 SHROOM4Q9ULL8 1493 aa39.69■■■■□ 3.94
ETFA-215ENST00000560595 DNAJC5BQ9UF47 199 aa39.24■■■■□ 3.87
ETFA-215ENST00000560595 EIF4G1Q04637 1599 aaKnown RBP39.08■■■■□ 3.85
ETFA-215ENST00000560595 CC2D2AQ9P2K1 1620 aa38.89■■■■□ 3.82
ETFA-215ENST00000560595 CECR2Q9BXF3 1484 aa38.63■■■■□ 3.77
ETFA-215ENST00000560595 SMARCA4P51532 1647 aa38.5■■■■□ 3.75
ETFA-215ENST00000560595 BAZ1AQ9NRL2 1556 aaPredicted RBP38.44■■■■□ 3.74
ETFA-215ENST00000560595 MROH2BQ7Z745 1585 aa38.25■■■■□ 3.71
ETFA-215ENST00000560595 ATAD2BQ9ULI0 1458 aa38.2■■■■□ 3.71
ETFA-215ENST00000560595 SMARCA2P51531 1590 aa38.17■■■■□ 3.7
ETFA-215ENST00000560595 NCAPD3P42695 1498 aa38.13■■■■□ 3.69
ETFA-215ENST00000560595 PEG3Q9GZU2 1588 aa38.1■■■■□ 3.69
ETFA-215ENST00000560595 HMGXB3Q12766 1538 aa38.01■■■■□ 3.67
ETFA-215ENST00000560595 BAZ1BQ9UIG0 1483 aaKnown RBP37.9■■■■□ 3.66
ETFA-215ENST00000560595 WIZO95785 1651 aa37.89■■■■□ 3.66
ETFA-215ENST00000560595 RSF1Q96T23 1441 aaPredicted RBP37.83■■■■□ 3.65
ETFA-215ENST00000560595 TOP2AP11388 1531 aaKnown RBP37.46■■■■□ 3.59
ETFA-215ENST00000560595 NESP48681 1621 aa37.23■■■■□ 3.55
ETFA-215ENST00000560595 LAMC3Q9Y6N6 1575 aa37.15■■■■□ 3.54
ETFA-215ENST00000560595 CADPSQ9ULU8 1353 aa37.01■■■■□ 3.51
ETFA-215ENST00000560595 CCDC88BA6NC98 1476 aa36.99■■■■□ 3.51
ETFA-215ENST00000560595 ERCC6Q03468 1493 aa36.99■■■■□ 3.51
ETFA-215ENST00000560595 SUPT5HO00267 1087 aaKnown RBP36.93■■■■□ 3.5
ETFA-215ENST00000560595 KIF21AQ7Z4S6 1674 aa36.88■■■■□ 3.49
ETFA-215ENST00000560595 CFTRP13569 1480 aa36.85■■■■□ 3.49
ETFA-215ENST00000560595 PDS5BQ9NTI5 1447 aa36.83■■■■□ 3.49
ETFA-215ENST00000560595 PRDM2Q13029 1718 aa36.75■■■■□ 3.47
ETFA-215ENST00000560595 THOC2Q8NI27 1593 aaKnown RBP36.68■■■■□ 3.46
ETFA-215ENST00000560595 FANCD2Q9BXW9 1451 aa36.62■■■■□ 3.45
ETFA-215ENST00000560595 CEP164Q9UPV0 1460 aa36.57■■■■□ 3.45
ETFA-215ENST00000560595 CUX2O14529 1486 aa36.54■■■■□ 3.44
ETFA-215ENST00000560595 MRC2Q9UBG0 1479 aa36.5■■■■□ 3.43
ETFA-215ENST00000560595 WDR62O43379 1518 aa36.39■■■■□ 3.42
ETFA-215ENST00000560595 URB2Q14146 1524 aaKnown RBP36.29■■■■□ 3.4
ETFA-215ENST00000560595 TOPBP1Q92547 1522 aa36.08■■■■□ 3.37
ETFA-215ENST00000560595 DNMBPQ6XZF7 1577 aa36.06■■■■□ 3.36
ETFA-215ENST00000560595 ABCC8Q09428 1581 aa36.03■■■■□ 3.36
ETFA-215ENST00000560595 CUX1P39880 1505 aa35.88■■■■□ 3.33
ETFA-215ENST00000560595 IFT140Q96RY7 1462 aa35.79■■■■□ 3.32
ETFA-215ENST00000560595 POLA1P09884 1462 aaPredicted RBP35.78■■■■□ 3.32
ETFA-215ENST00000560595 FGD5Q6ZNL6 1462 aa35.72■■■■□ 3.31
ETFA-215ENST00000560595 TARBP1Q13395 1621 aaKnown RBP35.72■■■■□ 3.31
ETFA-215ENST00000560595 WRNQ14191 1432 aaPredicted RBP eCLIP35.66■■■■□ 3.3
ETFA-215ENST00000560595 ZNF608Q9ULD9 1512 aaPredicted RBP35.65■■■■□ 3.3
ETFA-215ENST00000560595 BIVM-ERCC5R4GMW8 1640 aa35.65■■■■□ 3.3
ETFA-215ENST00000560595 SYNJ1O43426 1573 aa35.64■■■■□ 3.3
ETFA-215ENST00000560595 RAD54L2Q9Y4B4 1467 aa35.62■■■■□ 3.29
ETFA-215ENST00000560595 TOP2BQ02880 1626 aa35.62■■■■□ 3.29
ETFA-215ENST00000560595 SOGA1O94964 1423 aa35.58■■■■□ 3.29
ETFA-215ENST00000560595 EIF4G3O43432 1585 aaKnown RBP35.56■■■■□ 3.28
ETFA-215ENST00000560595 WDR97A6NE52 1622 aa35.51■■■■□ 3.28
ETFA-215ENST00000560595 AQRO60306 1485 aaKnown RBP eCLIP35.43■■■■□ 3.264e-6■□□□□ 10.1
ETFA-215ENST00000560595 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.25
ETFA-215ENST00000560595 ABCA10Q8WWZ4 1543 aa35.37■■■■□ 3.25
ETFA-215ENST00000560595 ABCA5Q8WWZ7 1642 aa35.28■■■■□ 3.24
ETFA-215ENST00000560595 PBRM1Q86U86 1689 aa35.24■■■■□ 3.23
ETFA-215ENST00000560595 GAPVD1Q14C86 1478 aa35.21■■■■□ 3.23
ETFA-215ENST00000560595 DNAJC5Q9H3Z4 198 aa35.19■■■■□ 3.22
ETFA-215ENST00000560595 GRIN2BQ13224 1484 aa35.17■■■■□ 3.22
ETFA-215ENST00000560595 SNAPC4Q5SXM2 1469 aa35.14■■■■□ 3.22
ETFA-215ENST00000560595 CHD1O14646 1710 aa35.13■■■■□ 3.21
ETFA-215ENST00000560595 MAGI1Q96QZ7 1491 aaPredicted RBP35.08■■■■□ 3.21
ETFA-215ENST00000560595 OSCARQ8IYS5 282 aa34.98■■■■□ 3.19
ETFA-215ENST00000560595 ERICH3Q5RHP9 1530 aa34.95■■■■□ 3.19
ETFA-215ENST00000560595 SYNJ2O15056 1496 aa34.94■■■■□ 3.18
ETFA-215ENST00000560595 ADAMTS12P58397 1594 aa34.92■■■■□ 3.18
ETFA-215ENST00000560595 FBLN2P98095 1184 aa34.92■■■■□ 3.18
ETFA-215ENST00000560595 KIF27Q86VH2 1401 aa34.89■■■■□ 3.18
ETFA-215ENST00000560595 CHMP7Q8WUX9 453 aaPredicted RBP34.85■■■■□ 3.17
ETFA-215ENST00000560595 TRIM41Q8WV44 630 aa34.85■■■■□ 3.17
ETFA-215ENST00000560595 FHAD1B1AJZ9 1412 aa34.79■■■■□ 3.16
ETFA-215ENST00000560595 GRIN2AQ12879 1464 aa34.74■■■■□ 3.15
ETFA-215ENST00000560595 IGF1RP08069 1367 aa34.72■■■■□ 3.15
ETFA-215ENST00000560595 CUL7Q14999 1698 aa34.71■■■■□ 3.15
ETFA-215ENST00000560595 CLASP1Q7Z460 1538 aa34.69■■■■□ 3.14
ETFA-215ENST00000560595 RUSC2Q8N2Y8 1516 aa34.66■■■■□ 3.14
ETFA-215ENST00000560595 CEP170Q5SW79 1584 aa34.62■■■■□ 3.13
ETFA-215ENST00000560595 NUP160Q12769 1436 aa34.57■■■■□ 3.13
ETFA-215ENST00000560595 CHIC1Q5VXU3 224 aa34.56■■■■□ 3.12
ETFA-215ENST00000560595 RIMBP3CA6NJZ7 1639 aa34.55■■■■□ 3.12
ETFA-215ENST00000560595 RIMBP3BA6NNM3 1639 aa34.55■■■■□ 3.12
ETFA-215ENST00000560595 RIMBP3Q9UFD9 1639 aa34.55■■■■□ 3.12
ETFA-215ENST00000560595 CARMIL1Q5VZK9 1371 aa34.51■■■■□ 3.12
ETFA-215ENST00000560595 ARHGEF11O15085 1522 aa34.51■■■■□ 3.12
ETFA-215ENST00000560595 SHROOM2Q13796 1616 aa34.36■■■■□ 3.09
ETFA-215ENST00000560595 RAPGEF2Q9Y4G8 1499 aa34.34■■■■□ 3.09
ETFA-215ENST00000560595 EEA1Q15075 1411 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms