Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACANP16112 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.77■□□□□ 0.92
ACANP16112 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.77■□□□□ 0.92
ACANP16112 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACANP16112 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.76■□□□□ 0.91
ACANP16112 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACANP16112 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACANP16112 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACANP16112 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACANP16112 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACANP16112 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.76■□□□□ 0.91
ACANP16112 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.76■□□□□ 0.91
ACANP16112 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.76■□□□□ 0.91
ACANP16112 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACANP16112 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.75■□□□□ 0.91
ACANP16112 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.75■□□□□ 0.91
ACANP16112 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.74■□□□□ 0.91
ACANP16112 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACANP16112 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
ACANP16112 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACANP16112 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ACANP16112 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.74■□□□□ 0.91
ACANP16112 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACANP16112 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACANP16112 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.73■□□□□ 0.91
ACANP16112 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ACANP16112 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACANP16112 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACANP16112 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.73■□□□□ 0.91
ACANP16112 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.73■□□□□ 0.91
ACANP16112 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.73■□□□□ 0.91
ACANP16112 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.72■□□□□ 0.91
ACANP16112 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACANP16112 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACANP16112 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ACANP16112 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACANP16112 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACANP16112 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ACANP16112 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACANP16112 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACANP16112 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACANP16112 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.71■□□□□ 0.91
ACANP16112 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ACANP16112 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.7■□□□□ 0.91
ACANP16112 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACANP16112 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.7■□□□□ 0.9
ACANP16112 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.7■□□□□ 0.9
ACANP16112 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACANP16112 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACANP16112 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACANP16112 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.69■□□□□ 0.9
ACANP16112 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.69■□□□□ 0.9
ACANP16112 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.69■□□□□ 0.9
ACANP16112 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.69■□□□□ 0.9
ACANP16112 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ACANP16112 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ACANP16112 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ACANP16112 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.68■□□□□ 0.9
ACANP16112 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.67■□□□□ 0.9
ACANP16112 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.67■□□□□ 0.9
ACANP16112 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ACANP16112 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.67■□□□□ 0.9
ACANP16112 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.66■□□□□ 0.9
ACANP16112 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ACANP16112 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACANP16112 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.65■□□□□ 0.9
ACANP16112 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.65■□□□□ 0.9
ACANP16112 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ACANP16112 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACANP16112 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACANP16112 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACANP16112 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.64■□□□□ 0.89
ACANP16112 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.64■□□□□ 0.89
ACANP16112 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACANP16112 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACANP16112 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACANP16112 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ACANP16112 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACANP16112 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.63■□□□□ 0.89
ACANP16112 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.62■□□□□ 0.89
ACANP16112 KRT125P-201ENST00000546827 989 ntBASIC20.62■□□□□ 0.89
ACANP16112 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ACANP16112 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ACANP16112 AC131281.2-201ENST00000520478 145 ntBASIC20.62■□□□□ 0.89
ACANP16112 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ACANP16112 AC018755.3-202ENST00000596210 929 ntBASIC20.62■□□□□ 0.89
ACANP16112 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACANP16112 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACANP16112 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.61■□□□□ 0.89
ACANP16112 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACANP16112 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACANP16112 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.61■□□□□ 0.89
ACANP16112 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.61■□□□□ 0.89
ACANP16112 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACANP16112 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACANP16112 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.6■□□□□ 0.89
ACANP16112 MIR4787-201ENST00000607364 84 ntBASIC20.6■□□□□ 0.89
ACANP16112 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
ACANP16112 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ACANP16112 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms