Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PFDN1O60925 AL024507.2-201ENST00000606070 2574 ntBASIC22.26■■□□□ 1.15
PFDN1O60925 PKD1P6-201ENST00000343738 4769 ntBASIC22.26■■□□□ 1.15
PFDN1O60925 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.26■■□□□ 1.15
PFDN1O60925 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PFDN1O60925 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PFDN1O60925 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
PFDN1O60925 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PFDN1O60925 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.25■■□□□ 1.15
PFDN1O60925 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PFDN1O60925 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.25■■□□□ 1.15
PFDN1O60925 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PFDN1O60925 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PFDN1O60925 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PFDN1O60925 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PFDN1O60925 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PFDN1O60925 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PFDN1O60925 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PFDN1O60925 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PFDN1O60925 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.23■■□□□ 1.15
PFDN1O60925 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PFDN1O60925 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.23■■□□□ 1.15
PFDN1O60925 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PFDN1O60925 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PFDN1O60925 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.22■■□□□ 1.15
PFDN1O60925 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PFDN1O60925 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PFDN1O60925 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.21■■□□□ 1.15
PFDN1O60925 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PFDN1O60925 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PFDN1O60925 ERN1-208ENST00000606895 2068 ntBASIC22.21■■□□□ 1.15
PFDN1O60925 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PFDN1O60925 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PFDN1O60925 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PFDN1O60925 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PFDN1O60925 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PFDN1O60925 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PFDN1O60925 LINC01003-201ENST00000564834 1764 ntBASIC22.19■■□□□ 1.14
PFDN1O60925 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PFDN1O60925 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PFDN1O60925 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PFDN1O60925 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PFDN1O60925 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PFDN1O60925 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PFDN1O60925 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PFDN1O60925 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.18■■□□□ 1.14
PFDN1O60925 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PFDN1O60925 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PFDN1O60925 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.16■■□□□ 1.14
PFDN1O60925 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PFDN1O60925 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PFDN1O60925 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PFDN1O60925 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PFDN1O60925 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PFDN1O60925 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PFDN1O60925 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PFDN1O60925 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PFDN1O60925 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PFDN1O60925 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PFDN1O60925 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PFDN1O60925 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PFDN1O60925 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PFDN1O60925 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.14■■□□□ 1.14
PFDN1O60925 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PFDN1O60925 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PFDN1O60925 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.14■■□□□ 1.13
PFDN1O60925 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
PFDN1O60925 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PFDN1O60925 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.13■■□□□ 1.13
PFDN1O60925 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PFDN1O60925 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PFDN1O60925 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.13■■□□□ 1.13
PFDN1O60925 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PFDN1O60925 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.12■■□□□ 1.13
PFDN1O60925 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PFDN1O60925 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PFDN1O60925 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PFDN1O60925 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PFDN1O60925 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
PFDN1O60925 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PFDN1O60925 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PFDN1O60925 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PFDN1O60925 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PFDN1O60925 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.11■■□□□ 1.13
PFDN1O60925 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.11■■□□□ 1.13
PFDN1O60925 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PFDN1O60925 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PFDN1O60925 DUSP8P4-201ENST00000399538 1761 ntBASIC22.1■■□□□ 1.13
PFDN1O60925 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PFDN1O60925 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PFDN1O60925 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PFDN1O60925 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PFDN1O60925 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PFDN1O60925 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PFDN1O60925 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.09■■□□□ 1.13
PFDN1O60925 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PFDN1O60925 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PFDN1O60925 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
PFDN1O60925 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.08■■□□□ 1.12
PFDN1O60925 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms