Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.6□□□□□ -0.079e-8■□□□□ 8.2
LSM11P83369 APP-213ENST00000464867 816 ntTSL 1 (best)13.19□□□□□ -0.39e-8■□□□□ 8.2
LSM11P83369 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.69e-8■□□□□ 8.2
LSM11P83369 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.691e-11■□□□□ 8.2
LSM11P83369 NDRG2-218ENST00000553593 978 ntTSL 310.46□□□□□ -0.736e-9■□□□□ 8.2
LSM11P83369 HNMT-206ENST00000475675 743 ntTSL 39.61□□□□□ -0.871e-11■□□□□ 8.2
LSM11P83369 ACAD11-210ENST00000510100 695 ntTSL 39.53□□□□□ -0.886e-9■□□□□ 8.2
LSM11P83369 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.43□□□□□ -0.91e-11■□□□□ 8.2
LSM11P83369 HNMT-205ENST00000467390 532 ntTSL 28.4□□□□□ -1.061e-11■□□□□ 8.2
LSM11P83369 HNMT-208ENST00000485653 675 ntTSL 58.32□□□□□ -1.081e-11■□□□□ 8.2
LSM11P83369 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.49□□□□□ -1.219e-8■□□□□ 8.2
LSM11P83369 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.07□□□□□ -1.289e-8■□□□□ 8.2
LSM11P83369 HNMT-207ENST00000480534 339 ntTSL 36.51□□□□□ -1.371e-11■□□□□ 8.2
LSM11P83369 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.641e-11■□□□□ 8.2
LSM11P83369 OPLAH-201ENST00000527993 635 ntTSL 519.69■□□□□ 0.741e-6■□□□□ 8.2
LSM11P83369 CPNE7-203ENST00000525982 576 ntTSL 519■□□□□ 0.631e-6■□□□□ 8.2
LSM11P83369 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.311e-6■□□□□ 8.2
LSM11P83369 TAL1-206ENST00000481091 504 ntTSL 313.44□□□□□ -0.261e-6■□□□□ 8.2
LSM11P83369 MAN2A2-202ENST00000557865 2671 ntTSL 212.63□□□□□ -0.391e-6■□□□□ 8.2
LSM11P83369 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.051e-6■□□□□ 8.2
LSM11P83369 TAL1-204ENST00000464796 237 ntTSL 1 (best)7.62□□□□□ -1.191e-6■□□□□ 8.2
LSM11P83369 MAN2A2-207ENST00000558374 731 ntTSL 37.44□□□□□ -1.221e-6■□□□□ 8.2
LSM11P83369 GAB3-206ENST00000496390 4240 ntTSL 1 (best)5.62□□□□□ -1.511e-6■□□□□ 8.2
LSM11P83369 NASP-212ENST00000527359 743 ntTSL 310.45□□□□□ -0.742e-12■□□□□ 8.2
LSM11P83369 NASP-205ENST00000437901 874 ntTSL 510.37□□□□□ -0.752e-12■□□□□ 8.2
LSM11P83369 NASP-204ENST00000437362 999 ntTSL 210.14□□□□□ -0.792e-12■□□□□ 8.2
LSM11P83369 NASP-206ENST00000453748 2080 ntTSL 29.49□□□□□ -0.892e-12■□□□□ 8.2
LSM11P83369 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 58.42□□□□□ -1.062e-12■□□□□ 8.2
LSM11P83369 NASP-214ENST00000527932 650 ntTSL 36.78□□□□□ -1.322e-12■□□□□ 8.2
LSM11P83369 SLC25A10-206ENST00000573246 898 ntTSL 312.46□□□□□ -0.418e-10■□□□□ 8.2
LSM11P83369 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.193e-6■□□□□ 8.1
LSM11P83369 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.923e-6■□□□□ 8.1
LSM11P83369 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.073e-6■□□□□ 8.1
LSM11P83369 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.13e-6■□□□□ 8.1
LSM11P83369 ATF7IP2-209ENST00000562396 1681 nt20.44■□□□□ 0.863e-7■□□□□ 8.1
LSM11P83369 MDK-208ENST00000481047 775 ntTSL 219.96■□□□□ 0.793e-7■□□□□ 8.1
LSM11P83369 MDK-212ENST00000533952 477 ntAPPRIS ALT2 TSL 317.28■□□□□ 0.363e-7■□□□□ 8.1
LSM11P83369 MDK-210ENST00000490240 603 ntTSL 1 (best)16.33■□□□□ 0.23e-7■□□□□ 8.1
LSM11P83369 ATF7IP2-216ENST00000569900 559 ntTSL 414.29□□□□□ -0.123e-7■□□□□ 8.1
LSM11P83369 ATF7IP2-207ENST00000561932 538 ntTSL 413.2□□□□□ -0.33e-7■□□□□ 8.1
LSM11P83369 ATF7IP2-217ENST00000569939 564 ntTSL 412.38□□□□□ -0.433e-7■□□□□ 8.1
LSM11P83369 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.14□□□□□ -0.473e-7■□□□□ 8.1
LSM11P83369 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.533e-7■□□□□ 8.1
LSM11P83369 ATF7IP2-218ENST00000570163 559 ntTSL 211.14□□□□□ -0.633e-7■□□□□ 8.1
LSM11P83369 MAPK8IP3-205ENST00000562042 330 ntTSL 310.81□□□□□ -0.683e-7■□□□□ 8.1
LSM11P83369 ATF7IP2-214ENST00000566316 576 ntTSL 29.57□□□□□ -0.883e-7■□□□□ 8.1
LSM11P83369 ATF7IP2-210ENST00000562527 625 ntTSL 39.19□□□□□ -0.943e-7■□□□□ 8.1
LSM11P83369 ATF7IP2-208ENST00000562102 558 ntTSL 48.2□□□□□ -1.13e-7■□□□□ 8.1
LSM11P83369 MAP4K4-209ENST00000421882 3416 ntTSL 58.1□□□□□ -1.113e-7■□□□□ 8.1
LSM11P83369 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.43□□□□□ -1.223e-7■□□□□ 8.1
LSM11P83369 ATF7IP2-211ENST00000564797 450 ntTSL 36.5□□□□□ -1.373e-7■□□□□ 8.1
LSM11P83369 RERE-216ENST00000505225 533 ntTSL 26.07□□□□□ -1.443e-7■□□□□ 8.1
LSM11P83369 PRPF4B-206ENST00000481109 2364 ntTSL 1 (best)9.78□□□□□ -0.841e-7■□□□□ 8.1
LSM11P83369 PRPF4B-202ENST00000461612 629 ntTSL 29.78□□□□□ -0.841e-7■□□□□ 8.1
LSM11P83369 PRPF4B-203ENST00000463634 2590 ntTSL 57.61□□□□□ -1.191e-7■□□□□ 8.1
LSM11P83369 ANKRD10-208ENST00000485844 641 ntTSL 26.94□□□□□ -1.31e-7■□□□□ 8.1
LSM11P83369 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.311e-7■□□□□ 8.1
LSM11P83369 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.06□□□□□ -1.441e-7■□□□□ 8.1
LSM11P83369 PRPF4B-205ENST00000480058 6775 ntTSL 1 (best)5.37□□□□□ -1.551e-7■□□□□ 8.1
LSM11P83369 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.97■□□□□ 0.312e-11■□□□□ 8.1
LSM11P83369 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.181e-7■□□□□ 8.1
LSM11P83369 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.162e-11■□□□□ 8.1
LSM11P83369 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.39■□□□□ 0.051e-7■□□□□ 8.1
LSM11P83369 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.58□□□□□ -0.081e-7■□□□□ 8.1
LSM11P83369 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.22□□□□□ -0.131e-7■□□□□ 8.1
LSM11P83369 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.291e-7■□□□□ 8.1
LSM11P83369 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)12.14□□□□□ -0.472e-11■□□□□ 8.1
LSM11P83369 SREBF2-208ENST00000491541 4043 ntTSL 1 (best)9.39□□□□□ -0.912e-11■□□□□ 8.1
LSM11P83369 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.62□□□□□ -0.234e-12■□□□□ 8.1
LSM11P83369 DNM2-221ENST00000593203 2507 ntTSL 213.08□□□□□ -0.322e-6■□□□□ 8.1
LSM11P83369 DNM2-215ENST00000590806 5651 ntTSL 213.08□□□□□ -0.322e-6■□□□□ 8.1
LSM11P83369 DNM2-219ENST00000591818 538 ntTSL 412.77□□□□□ -0.372e-6■□□□□ 8.1
LSM11P83369 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC10.47□□□□□ -0.732e-6■□□□□ 8.1
LSM11P83369 EXOC7-212ENST00000467586 2393 ntTSL 217.22■□□□□ 0.355e-6■□□□□ 8.1
LSM11P83369 HDAC10-209ENST00000471375 928 ntTSL 516.96■□□□□ 0.315e-6■□□□□ 8.1
LSM11P83369 FMO5-205ENST00000527849 2410 ntTSL 516.04■□□□□ 0.165e-6■□□□□ 8.1
LSM11P83369 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.1■□□□□ 0.015e-6■□□□□ 8.1
LSM11P83369 RANGRF-206ENST00000580777 784 ntTSL 314.89□□□□□ -0.035e-6■□□□□ 8.1
LSM11P83369 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.19□□□□□ -0.145e-6■□□□□ 8.1
LSM11P83369 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.25e-6■□□□□ 8.1
LSM11P83369 MORF4L2-212ENST00000474653 573 ntTSL 213.58□□□□□ -0.245e-6■□□□□ 8.1
LSM11P83369 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.42□□□□□ -0.265e-6■□□□□ 8.1
LSM11P83369 DDX5-208ENST00000578491 463 ntTSL 213.16□□□□□ -0.38e-9■□□□□ 8.1
LSM11P83369 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.94□□□□□ -0.345e-6■□□□□ 8.1
LSM11P83369 AC138969.2-201ENST00000532739 9932 ntBASIC12.84□□□□□ -0.355e-6■□□□□ 8.1
LSM11P83369 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.33□□□□□ -0.445e-6■□□□□ 8.1
LSM11P83369 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.455e-6■□□□□ 8.1
LSM11P83369 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC11.63□□□□□ -0.555e-6■□□□□ 8.1
LSM11P83369 MORF4L2-202ENST00000418819 849 ntTSL 311.56□□□□□ -0.565e-6■□□□□ 8.1
LSM11P83369 MORF4L2-207ENST00000434230 899 ntTSL 211.56□□□□□ -0.565e-6■□□□□ 8.1
LSM11P83369 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.595e-6■□□□□ 8.1
LSM11P83369 MORF4L2-214ENST00000492116 582 ntTSL 211.01□□□□□ -0.655e-6■□□□□ 8.1
LSM11P83369 EXOC7-203ENST00000357231 1924 ntTSL 1 (best)11.01□□□□□ -0.655e-6■□□□□ 8.1
LSM11P83369 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.685e-6■□□□□ 8.1
LSM11P83369 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.715e-6■□□□□ 8.1
LSM11P83369 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC10.25□□□□□ -0.775e-6■□□□□ 8.1
LSM11P83369 MORF4L2-204ENST00000422355 562 ntTSL 210.08□□□□□ -0.85e-6■□□□□ 8.1
LSM11P83369 MORF4L2-209ENST00000442614 869 ntTSL 29.92□□□□□ -0.825e-6■□□□□ 8.1
LSM11P83369 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.845e-6■□□□□ 8.1
LSM11P83369 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC9.58□□□□□ -0.885e-6■□□□□ 8.1
Retrieved 100 of 11,495 protein–RNA pairs in 64.7 ms