RNA–Protein interactions for RNA: ENST00000369575.7

GAB3-202, Transcript of GRB2 associated binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GAB3, Length 4,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAB3-202ENST00000369575 NISCHQ9Y2I1 1504 aa17.59■□□□□ 0.41
GAB3-202ENST00000369575 DCAF8L2P0C7V8 631 aa17.15■□□□□ 0.34
GAB3-202ENST00000369575 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
GAB3-202ENST00000369575 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
GAB3-202ENST00000369575 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.07
GAB3-202ENST00000369575 ABCC9O60706 1549 aa15.25■□□□□ 0.03
GAB3-202ENST00000369575 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
GAB3-202ENST00000369575 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
GAB3-202ENST00000369575 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
GAB3-202ENST00000369575 TTBK1Q5TCY1 1321 aaPredicted RBP14.84□□□□□ -0.03
GAB3-202ENST00000369575 TRIM41Q8WV44 630 aa14.83□□□□□ -0.03
GAB3-202ENST00000369575 LOC105371045A0A1W2PR82 267 aa14.62□□□□□ -0.07
GAB3-202ENST00000369575 CHIC1Q5VXU3 224 aa14.61□□□□□ -0.07
GAB3-202ENST00000369575 PPARGC1BQ86YN6 1023 aaKnown RBP14.58□□□□□ -0.08
GAB3-202ENST00000369575 ZCCHC6Q5VYS8 1495 aaKnown RBP14.58□□□□□ -0.08
GAB3-202ENST00000369575 PCGF6Q9BYE7 350 aa14.56□□□□□ -0.08
GAB3-202ENST00000369575 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.08
GAB3-202ENST00000369575 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
GAB3-202ENST00000369575 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
GAB3-202ENST00000369575 ATP1B4Q9UN42 357 aaPredicted RBP14.43□□□□□ -0.1
GAB3-202ENST00000369575 APLP2Q06481 763 aa14.41□□□□□ -0.1
GAB3-202ENST00000369575 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
GAB3-202ENST00000369575 ITGAEP38570 1179 aa14.05□□□□□ -0.16
GAB3-202ENST00000369575 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
GAB3-202ENST00000369575 RSF1Q96T23 1441 aaPredicted RBP14.03□□□□□ -0.16
GAB3-202ENST00000369575 CCER1Q8TC90 406 aaPredicted RBP14.02□□□□□ -0.16
GAB3-202ENST00000369575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
GAB3-202ENST00000369575 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
GAB3-202ENST00000369575 NACADO15069 1562 aa13.97□□□□□ -0.17
GAB3-202ENST00000369575 FBLN2P98095 1184 aa13.95□□□□□ -0.18
GAB3-202ENST00000369575 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
GAB3-202ENST00000369575 TRIM26Q12899 539 aaPredicted RBP13.9□□□□□ -0.18
GAB3-202ENST00000369575 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
GAB3-202ENST00000369575 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
GAB3-202ENST00000369575 DCAF1Q9Y4B6 1507 aa13.84□□□□□ -0.19
GAB3-202ENST00000369575 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
GAB3-202ENST00000369575 MYO15BQ96JP2 1530 aa13.77□□□□□ -0.2
GAB3-202ENST00000369575 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
GAB3-202ENST00000369575 FAM50AQ14320 339 aaKnown RBP13.68□□□□□ -0.22
GAB3-202ENST00000369575 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
GAB3-202ENST00000369575 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
GAB3-202ENST00000369575 HRCP23327 699 aa13.63□□□□□ -0.23
GAB3-202ENST00000369575 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
GAB3-202ENST00000369575 WIZO95785 1651 aa13.55□□□□□ -0.24
GAB3-202ENST00000369575 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.244e-6■■■■□ 19.5
GAB3-202ENST00000369575 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
GAB3-202ENST00000369575 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
GAB3-202ENST00000369575 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
GAB3-202ENST00000369575 SOGA1O94964 1423 aa13.49□□□□□ -0.25
GAB3-202ENST00000369575 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
GAB3-202ENST00000369575 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
GAB3-202ENST00000369575 POLR3GLQ9BT43 218 aa13.45□□□□□ -0.26
GAB3-202ENST00000369575 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
GAB3-202ENST00000369575 TRIM52Q96A61 297 aa13.43□□□□□ -0.26
GAB3-202ENST00000369575 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
GAB3-202ENST00000369575 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
GAB3-202ENST00000369575 ATAD2BQ9ULI0 1458 aa13.4□□□□□ -0.26
GAB3-202ENST00000369575 CLIP1P30622 1438 aa13.35□□□□□ -0.27
GAB3-202ENST00000369575 CHIC2Q9UKJ5 165 aa13.34□□□□□ -0.27
GAB3-202ENST00000369575 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.28
GAB3-202ENST00000369575 CEP162Q5TB80 1403 aa13.32□□□□□ -0.28
GAB3-202ENST00000369575 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
GAB3-202ENST00000369575 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
GAB3-202ENST00000369575 ZNF326Q5BKZ1 582 aaKnown RBP13.3□□□□□ -0.28
GAB3-202ENST00000369575 KIF27Q86VH2 1401 aa13.29□□□□□ -0.28
GAB3-202ENST00000369575 SMARCA2P51531 1590 aa13.29□□□□□ -0.28
GAB3-202ENST00000369575 CUX2O14529 1486 aa13.28□□□□□ -0.28
GAB3-202ENST00000369575 RUSC2Q8N2Y8 1516 aa13.28□□□□□ -0.28
GAB3-202ENST00000369575 TOP2AP11388 1531 aaKnown RBP13.27□□□□□ -0.29
GAB3-202ENST00000369575 CADPSQ9ULU8 1353 aa13.25□□□□□ -0.29
GAB3-202ENST00000369575 KCNH8Q96L42 1107 aa13.24□□□□□ -0.29
GAB3-202ENST00000369575 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
GAB3-202ENST00000369575 CARMIL1Q5VZK9 1371 aa13.21□□□□□ -0.29
GAB3-202ENST00000369575 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
GAB3-202ENST00000369575 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
GAB3-202ENST00000369575 MTUS2Q5JR59 1369 aa13.18□□□□□ -0.3
GAB3-202ENST00000369575 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
GAB3-202ENST00000369575 EEA1Q15075 1411 aa13.18□□□□□ -0.3
GAB3-202ENST00000369575 EIF4G1Q04637 1599 aaKnown RBP13.16□□□□□ -0.3
GAB3-202ENST00000369575 CEP164Q9UPV0 1460 aa13.15□□□□□ -0.3
GAB3-202ENST00000369575 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
GAB3-202ENST00000369575 CENPBP07199 599 aaPredicted RBP13.14□□□□□ -0.31
GAB3-202ENST00000369575 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
GAB3-202ENST00000369575 KANK4Q5T7N3 995 aaPredicted RBP13.14□□□□□ -0.31
GAB3-202ENST00000369575 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
GAB3-202ENST00000369575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.315e-6■□□□□ 11.1
GAB3-202ENST00000369575 SENP3Q9H4L4 574 aaPredicted RBP13.12□□□□□ -0.31
GAB3-202ENST00000369575 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
GAB3-202ENST00000369575 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
GAB3-202ENST00000369575 HIRIP3Q9BW71 556 aaPredicted RBP13.1□□□□□ -0.31
GAB3-202ENST00000369575 NESP48681 1621 aa13.1□□□□□ -0.31
GAB3-202ENST00000369575 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
GAB3-202ENST00000369575 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
GAB3-202ENST00000369575 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
GAB3-202ENST00000369575 NCAPD3P42695 1498 aa13.07□□□□□ -0.32
GAB3-202ENST00000369575 PLEKHD1A6NEE1 506 aa13.04□□□□□ -0.32
GAB3-202ENST00000369575 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
GAB3-202ENST00000369575 CHGAP10645 457 aaKnown RBP13.01□□□□□ -0.33
GAB3-202ENST00000369575 TSPY4P0CV99 314 aa13□□□□□ -0.33
GAB3-202ENST00000369575 TSPY10P0CW01 314 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms