Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 KRT8P7-201ENST00000533003 1432 ntBASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 AC016734.2-201ENST00000624325 1377 ntBASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 AL450487.1-201ENST00000426799 995 ntBASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 HLA-F-220ENST00000434407 884 ntBASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 HOXB1-202ENST00000577092 1414 ntBASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNAP47Q5SQN1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 MIR3652-201ENST00000579335 131 ntBASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 AC007613.1-201ENST00000572811 2597 ntBASIC17.83■□□□□ 0.44
SNAP47Q5SQN1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 TSPY22P-201ENST00000427496 604 ntBASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 NPAP1P7-201ENST00000613027 823 ntBASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SNAP47Q5SQN1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNAP47Q5SQN1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms