RNA–Protein interactions for RNA: ENST00000366523.5

EFCAB2-203, Transcript of EF-hand calcium binding domain 2, humanhuman

APPRIS P1 TSL 3 BASIC

Gene EFCAB2, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-203ENST00000366523 NISCHQ9Y2I1 1504 aa44.93■■■■■ 4.78
EFCAB2-203ENST00000366523 CCDC180Q9P1Z9 1646 aa40.2■■■■■ 4.03
EFCAB2-203ENST00000366523 ABCC9O60706 1549 aa39.87■■■■□ 3.97
EFCAB2-203ENST00000366523 RB1CC1Q8TDY2 1594 aa38.14■■■■□ 3.7
EFCAB2-203ENST00000366523 NACADO15069 1562 aa37.97■■■■□ 3.67
EFCAB2-203ENST00000366523 DCAF8L2P0C7V8 631 aa37.77■■■■□ 3.64
EFCAB2-203ENST00000366523 MYO15BQ96JP2 1530 aa37.58■■■■□ 3.61
EFCAB2-203ENST00000366523 ZCCHC6Q5VYS8 1495 aaKnown RBP37.29■■■■□ 3.56
EFCAB2-203ENST00000366523 DCAF1Q9Y4B6 1507 aa37.19■■■■□ 3.54
EFCAB2-203ENST00000366523 UNC13AQ9UPW8 1703 aa37.19■■■■□ 3.54
EFCAB2-203ENST00000366523 PABPN1Q86U42 306 aaKnown RBP eCLIP37.17■■■■□ 3.54
EFCAB2-203ENST00000366523 DNAJC5BQ9UF47 199 aa37.15■■■■□ 3.54
EFCAB2-203ENST00000366523 BICRAQ9NZM4 1560 aa36.97■■■■□ 3.51
EFCAB2-203ENST00000366523 SHROOM4Q9ULL8 1493 aa36.61■■■■□ 3.45
EFCAB2-203ENST00000366523 SCRIBQ14160 1630 aa36.58■■■■□ 3.45
EFCAB2-203ENST00000366523 EIF4G1Q04637 1599 aaKnown RBP36.06■■■■□ 3.36
EFCAB2-203ENST00000366523 CC2D2AQ9P2K1 1620 aa36.05■■■■□ 3.36
EFCAB2-203ENST00000366523 CECR2Q9BXF3 1484 aa35.92■■■■□ 3.34
EFCAB2-203ENST00000366523 NCAPD3P42695 1498 aa35.05■■■■□ 3.2
EFCAB2-203ENST00000366523 SMARCA4P51532 1647 aa34.96■■■■□ 3.19
EFCAB2-203ENST00000366523 ATAD2BQ9ULI0 1458 aa34.96■■■■□ 3.19
EFCAB2-203ENST00000366523 SMARCA2P51531 1590 aa34.88■■■■□ 3.17
EFCAB2-203ENST00000366523 BAZ1AQ9NRL2 1556 aaPredicted RBP34.87■■■■□ 3.17
EFCAB2-203ENST00000366523 HMGXB3Q12766 1538 aa34.8■■■■□ 3.16
EFCAB2-203ENST00000366523 PEG3Q9GZU2 1588 aa34.66■■■■□ 3.14
EFCAB2-203ENST00000366523 BAZ1BQ9UIG0 1483 aaKnown RBP34.62■■■■□ 3.13
EFCAB2-203ENST00000366523 MROH2BQ7Z745 1585 aa34.59■■■■□ 3.13
EFCAB2-203ENST00000366523 ERCC6Q03468 1493 aa34.43■■■■□ 3.1
EFCAB2-203ENST00000366523 CUX2O14529 1486 aa34.32■■■■□ 3.08
EFCAB2-203ENST00000366523 NESP48681 1621 aa34.31■■■■□ 3.08
EFCAB2-203ENST00000366523 LAMC3Q9Y6N6 1575 aa34.2■■■■□ 3.07
EFCAB2-203ENST00000366523 WIZO95785 1651 aa34.16■■■■□ 3.06
EFCAB2-203ENST00000366523 PDS5BQ9NTI5 1447 aa34.02■■■■□ 3.04
EFCAB2-203ENST00000366523 RSF1Q96T23 1441 aaPredicted RBP34.01■■■■□ 3.03
EFCAB2-203ENST00000366523 CADPSQ9ULU8 1353 aa33.99■■■■□ 3.03
EFCAB2-203ENST00000366523 DNAJC5Q9H3Z4 198 aa33.98■■■■□ 3.03
EFCAB2-203ENST00000366523 THOC2Q8NI27 1593 aaKnown RBP33.93■■■■□ 3.02
EFCAB2-203ENST00000366523 KIF21AQ7Z4S6 1674 aa33.87■■■■□ 3.01
EFCAB2-203ENST00000366523 TOP2AP11388 1531 aaKnown RBP33.8■■■■□ 3
EFCAB2-203ENST00000366523 MRC2Q9UBG0 1479 aa33.67■■■□□ 2.98
EFCAB2-203ENST00000366523 CFTRP13569 1480 aa33.66■■■□□ 2.98
EFCAB2-203ENST00000366523 CEP164Q9UPV0 1460 aa33.59■■■□□ 2.97
EFCAB2-203ENST00000366523 FANCD2Q9BXW9 1451 aa33.57■■■□□ 2.97
EFCAB2-203ENST00000366523 WDR62O43379 1518 aa33.57■■■□□ 2.96
EFCAB2-203ENST00000366523 CCDC88BA6NC98 1476 aa33.41■■■□□ 2.94
EFCAB2-203ENST00000366523 PRDM2Q13029 1718 aa33.29■■■□□ 2.92
EFCAB2-203ENST00000366523 URB2Q14146 1524 aaKnown RBP33.26■■■□□ 2.91
EFCAB2-203ENST00000366523 ABCC8Q09428 1581 aa33■■■□□ 2.87
EFCAB2-203ENST00000366523 TOPBP1Q92547 1522 aa32.97■■■□□ 2.87
EFCAB2-203ENST00000366523 IFT140Q96RY7 1462 aa32.93■■■□□ 2.86
EFCAB2-203ENST00000366523 DNMBPQ6XZF7 1577 aa32.87■■■□□ 2.85
EFCAB2-203ENST00000366523 OSCARQ8IYS5 282 aa32.82■■■□□ 2.84
EFCAB2-203ENST00000366523 ZNF608Q9ULD9 1512 aaPredicted RBP32.79■■■□□ 2.84
EFCAB2-203ENST00000366523 SUPT5HO00267 1087 aaKnown RBP32.67■■■□□ 2.82
EFCAB2-203ENST00000366523 POLA1P09884 1462 aaPredicted RBP32.64■■■□□ 2.82
EFCAB2-203ENST00000366523 TARBP1Q13395 1621 aaKnown RBP32.64■■■□□ 2.82
EFCAB2-203ENST00000366523 EIF4G3O43432 1585 aaKnown RBP32.62■■■□□ 2.81
EFCAB2-203ENST00000366523 AQRO60306 1485 aaKnown RBP eCLIP32.54■■■□□ 2.86e-6■■■■□ 25.1
EFCAB2-203ENST00000366523 TRIM41Q8WV44 630 aa32.54■■■□□ 2.8
EFCAB2-203ENST00000366523 SOGA1O94964 1423 aa32.52■■■□□ 2.8
EFCAB2-203ENST00000366523 RAD54L2Q9Y4B4 1467 aa32.49■■■□□ 2.79
EFCAB2-203ENST00000366523 CUX1P39880 1505 aa32.48■■■□□ 2.79
EFCAB2-203ENST00000366523 FGD5Q6ZNL6 1462 aa32.48■■■□□ 2.79
EFCAB2-203ENST00000366523 WDR97A6NE52 1622 aa32.4■■■□□ 2.78
EFCAB2-203ENST00000366523 TDRD9Q8NDG6 1382 aaKnown RBP32.39■■■□□ 2.78
EFCAB2-203ENST00000366523 CHD1O14646 1710 aa32.31■■■□□ 2.76
EFCAB2-203ENST00000366523 FBLN2P98095 1184 aa32.28■■■□□ 2.76
EFCAB2-203ENST00000366523 RIMBP3CA6NJZ7 1639 aa32.28■■■□□ 2.76
EFCAB2-203ENST00000366523 RIMBP3BA6NNM3 1639 aa32.28■■■□□ 2.76
EFCAB2-203ENST00000366523 RIMBP3Q9UFD9 1639 aa32.28■■■□□ 2.76
EFCAB2-203ENST00000366523 ARHGEF11O15085 1522 aa32.22■■■□□ 2.75
EFCAB2-203ENST00000366523 GRIN2BQ13224 1484 aa32.22■■■□□ 2.75
EFCAB2-203ENST00000366523 SNAPC4Q5SXM2 1469 aa32.22■■■□□ 2.75
EFCAB2-203ENST00000366523 MAGI1Q96QZ7 1491 aaPredicted RBP32.2■■■□□ 2.75
EFCAB2-203ENST00000366523 ABCA10Q8WWZ4 1543 aa32.16■■■□□ 2.74
EFCAB2-203ENST00000366523 GAPVD1Q14C86 1478 aa32.13■■■□□ 2.73
EFCAB2-203ENST00000366523 CHMP7Q8WUX9 453 aaPredicted RBP32.13■■■□□ 2.73
EFCAB2-203ENST00000366523 WRNQ14191 1432 aaPredicted RBP eCLIP32.09■■■□□ 2.73
EFCAB2-203ENST00000366523 SYNJ2O15056 1496 aa32.07■■■□□ 2.72
EFCAB2-203ENST00000366523 TOP2BQ02880 1626 aa32.06■■■□□ 2.72
EFCAB2-203ENST00000366523 BIVM-ERCC5R4GMW8 1640 aa32.05■■■□□ 2.72
EFCAB2-203ENST00000366523 ABCA5Q8WWZ7 1642 aa32.04■■■□□ 2.72
EFCAB2-203ENST00000366523 PBRM1Q86U86 1689 aa32.04■■■□□ 2.72
EFCAB2-203ENST00000366523 SYNJ1O43426 1573 aa32.02■■■□□ 2.72
EFCAB2-203ENST00000366523 CLASP1Q7Z460 1538 aa31.99■■■□□ 2.71
EFCAB2-203ENST00000366523 CYB5RLQ6IPT4 315 aa31.98■■■□□ 2.71
EFCAB2-203ENST00000366523 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
EFCAB2-203ENST00000366523 GRIN2AQ12879 1464 aa31.78■■■□□ 2.68
EFCAB2-203ENST00000366523 ADAMTS12P58397 1594 aa31.78■■■□□ 2.68
EFCAB2-203ENST00000366523 ERICH3Q5RHP9 1530 aa31.76■■■□□ 2.68
EFCAB2-203ENST00000366523 FHAD1B1AJZ9 1412 aa31.75■■■□□ 2.67
EFCAB2-203ENST00000366523 NUP160Q12769 1436 aa31.68■■■□□ 2.66
EFCAB2-203ENST00000366523 CEP170Q5SW79 1584 aa31.62■■■□□ 2.65
EFCAB2-203ENST00000366523 TRHP20396 242 aaPredicted RBP31.53■■■□□ 2.64
EFCAB2-203ENST00000366523 SHROOM2Q13796 1616 aa31.49■■■□□ 2.63
EFCAB2-203ENST00000366523 KIF27Q86VH2 1401 aa31.48■■■□□ 2.63
EFCAB2-203ENST00000366523 ERCC6L2Q5T890 1561 aa31.46■■■□□ 2.63
EFCAB2-203ENST00000366523 IGF1RP08069 1367 aa31.43■■■□□ 2.62
EFCAB2-203ENST00000366523 JPH4Q96JJ6 628 aa31.38■■■□□ 2.61
EFCAB2-203ENST00000366523 PRG4Q92954 1404 aaPredicted RBP31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms