RNA–Protein interactions for RNA: ENST00000449500.1

MHENCR-202, Transcript of melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489, humanhuman

TSL 2 BASIC

Gene MHENCR, Length 801 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MHENCR-202ENST00000449500 NISCHQ9Y2I1 1504 aa44.59■■■■■ 4.73
MHENCR-202ENST00000449500 CCDC180Q9P1Z9 1646 aa39.83■■■■□ 3.97
MHENCR-202ENST00000449500 ABCC9O60706 1549 aa39.13■■■■□ 3.85
MHENCR-202ENST00000449500 RB1CC1Q8TDY2 1594 aa37.61■■■■□ 3.61
MHENCR-202ENST00000449500 NACADO15069 1562 aa37.51■■■■□ 3.59
MHENCR-202ENST00000449500 DCAF8L2P0C7V8 631 aa37.35■■■■□ 3.57
MHENCR-202ENST00000449500 MYO15BQ96JP2 1530 aa37.21■■■■□ 3.55
MHENCR-202ENST00000449500 ZCCHC6Q5VYS8 1495 aaKnown RBP37.07■■■■□ 3.53
MHENCR-202ENST00000449500 DCAF1Q9Y4B6 1507 aa36.93■■■■□ 3.5
MHENCR-202ENST00000449500 UNC13AQ9UPW8 1703 aa36.71■■■■□ 3.47
MHENCR-202ENST00000449500 PABPN1Q86U42 306 aaKnown RBP eCLIP36.48■■■■□ 3.431e-6■■■■■ 36.9
MHENCR-202ENST00000449500 BICRAQ9NZM4 1560 aa36.4■■■■□ 3.42
MHENCR-202ENST00000449500 SCRIBQ14160 1630 aa36.23■■■■□ 3.39
MHENCR-202ENST00000449500 SHROOM4Q9ULL8 1493 aa36.12■■■■□ 3.37
MHENCR-202ENST00000449500 DNAJC5BQ9UF47 199 aa36.09■■■■□ 3.37
MHENCR-202ENST00000449500 EIF4G1Q04637 1599 aaKnown RBP35.5■■■■□ 3.27
MHENCR-202ENST00000449500 CC2D2AQ9P2K1 1620 aa35.41■■■■□ 3.26
MHENCR-202ENST00000449500 CECR2Q9BXF3 1484 aa35.22■■■■□ 3.23
MHENCR-202ENST00000449500 SMARCA4P51532 1647 aa34.66■■■■□ 3.14
MHENCR-202ENST00000449500 BAZ1AQ9NRL2 1556 aaPredicted RBP34.62■■■■□ 3.13
MHENCR-202ENST00000449500 NCAPD3P42695 1498 aa34.58■■■■□ 3.13
MHENCR-202ENST00000449500 SMARCA2P51531 1590 aa34.54■■■■□ 3.12
MHENCR-202ENST00000449500 ATAD2BQ9ULI0 1458 aa34.52■■■■□ 3.12
MHENCR-202ENST00000449500 HMGXB3Q12766 1538 aa34.4■■■■□ 3.1
MHENCR-202ENST00000449500 PEG3Q9GZU2 1588 aa34.36■■■■□ 3.09
MHENCR-202ENST00000449500 MROH2BQ7Z745 1585 aa34.32■■■■□ 3.08
MHENCR-202ENST00000449500 BAZ1BQ9UIG0 1483 aaKnown RBP34.27■■■■□ 3.08
MHENCR-202ENST00000449500 WIZO95785 1651 aa33.94■■■■□ 3.02
MHENCR-202ENST00000449500 RSF1Q96T23 1441 aaPredicted RBP33.84■■■■□ 3.01
MHENCR-202ENST00000449500 ERCC6Q03468 1493 aa33.82■■■■□ 3
MHENCR-202ENST00000449500 LAMC3Q9Y6N6 1575 aa33.75■■■□□ 2.99
MHENCR-202ENST00000449500 NESP48681 1621 aa33.75■■■□□ 2.99
MHENCR-202ENST00000449500 TOP2AP11388 1531 aaKnown RBP33.61■■■□□ 2.97
MHENCR-202ENST00000449500 CUX2O14529 1486 aa33.57■■■□□ 2.97
MHENCR-202ENST00000449500 CADPSQ9ULU8 1353 aa33.55■■■□□ 2.96
MHENCR-202ENST00000449500 PDS5BQ9NTI5 1447 aa33.53■■■□□ 2.96
MHENCR-202ENST00000449500 KIF21AQ7Z4S6 1674 aa33.4■■■□□ 2.94
MHENCR-202ENST00000449500 THOC2Q8NI27 1593 aaKnown RBP33.35■■■□□ 2.93
MHENCR-202ENST00000449500 CFTRP13569 1480 aa33.29■■■□□ 2.92
MHENCR-202ENST00000449500 CCDC88BA6NC98 1476 aa33.18■■■□□ 2.9
MHENCR-202ENST00000449500 MRC2Q9UBG0 1479 aa33.17■■■□□ 2.9
MHENCR-202ENST00000449500 CEP164Q9UPV0 1460 aa33.17■■■□□ 2.9
MHENCR-202ENST00000449500 FANCD2Q9BXW9 1451 aa33.16■■■□□ 2.9
MHENCR-202ENST00000449500 PRDM2Q13029 1718 aa33.08■■■□□ 2.89
MHENCR-202ENST00000449500 WDR62O43379 1518 aa33.06■■■□□ 2.88
MHENCR-202ENST00000449500 DNAJC5Q9H3Z4 198 aa32.82■■■□□ 2.84
MHENCR-202ENST00000449500 URB2Q14146 1524 aaKnown RBP32.81■■■□□ 2.84
MHENCR-202ENST00000449500 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
MHENCR-202ENST00000449500 ABCC8Q09428 1581 aa32.67■■■□□ 2.82
MHENCR-202ENST00000449500 TOPBP1Q92547 1522 aa32.59■■■□□ 2.81
MHENCR-202ENST00000449500 DNMBPQ6XZF7 1577 aa32.56■■■□□ 2.8
MHENCR-202ENST00000449500 IFT140Q96RY7 1462 aa32.48■■■□□ 2.79
MHENCR-202ENST00000449500 POLA1P09884 1462 aaPredicted RBP32.29■■■□□ 2.76
MHENCR-202ENST00000449500 ZNF608Q9ULD9 1512 aaPredicted RBP32.27■■■□□ 2.76
MHENCR-202ENST00000449500 TARBP1Q13395 1621 aaKnown RBP32.26■■■□□ 2.75
MHENCR-202ENST00000449500 CUX1P39880 1505 aa32.21■■■□□ 2.75
MHENCR-202ENST00000449500 EIF4G3O43432 1585 aaKnown RBP32.19■■■□□ 2.74
MHENCR-202ENST00000449500 SOGA1O94964 1423 aa32.17■■■□□ 2.74
MHENCR-202ENST00000449500 FGD5Q6ZNL6 1462 aa32.17■■■□□ 2.74
MHENCR-202ENST00000449500 OSCARQ8IYS5 282 aa32.13■■■□□ 2.73
MHENCR-202ENST00000449500 RAD54L2Q9Y4B4 1467 aa32.11■■■□□ 2.73
MHENCR-202ENST00000449500 AQRO60306 1485 aaKnown RBP eCLIP32.09■■■□□ 2.733e-7■■■■■ 41.6
MHENCR-202ENST00000449500 WDR97A6NE52 1622 aa32.08■■■□□ 2.73
MHENCR-202ENST00000449500 TDRD9Q8NDG6 1382 aaKnown RBP31.99■■■□□ 2.71
MHENCR-202ENST00000449500 WRNQ14191 1432 aaPredicted RBP eCLIP31.95■■■□□ 2.71
MHENCR-202ENST00000449500 BIVM-ERCC5R4GMW8 1640 aa31.93■■■□□ 2.7
MHENCR-202ENST00000449500 TOP2BQ02880 1626 aa31.92■■■□□ 2.7
MHENCR-202ENST00000449500 ABCA10Q8WWZ4 1543 aa31.87■■■□□ 2.69
MHENCR-202ENST00000449500 CHD1O14646 1710 aa31.85■■■□□ 2.69
MHENCR-202ENST00000449500 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
MHENCR-202ENST00000449500 SYNJ1O43426 1573 aa31.84■■■□□ 2.69
MHENCR-202ENST00000449500 MAGI1Q96QZ7 1491 aaPredicted RBP31.81■■■□□ 2.68
MHENCR-202ENST00000449500 GAPVD1Q14C86 1478 aa31.8■■■□□ 2.68
MHENCR-202ENST00000449500 SNAPC4Q5SXM2 1469 aa31.8■■■□□ 2.68
MHENCR-202ENST00000449500 FBLN2P98095 1184 aa31.79■■■□□ 2.68
MHENCR-202ENST00000449500 PBRM1Q86U86 1689 aa31.76■■■□□ 2.68
MHENCR-202ENST00000449500 ABCA5Q8WWZ7 1642 aa31.76■■■□□ 2.67
MHENCR-202ENST00000449500 CHMP7Q8WUX9 453 aaPredicted RBP31.69■■■□□ 2.66
MHENCR-202ENST00000449500 SYNJ2O15056 1496 aa31.68■■■□□ 2.66
MHENCR-202ENST00000449500 RIMBP3CA6NJZ7 1639 aa31.6■■■□□ 2.65
MHENCR-202ENST00000449500 RIMBP3BA6NNM3 1639 aa31.6■■■□□ 2.65
MHENCR-202ENST00000449500 RIMBP3Q9UFD9 1639 aa31.6■■■□□ 2.65
MHENCR-202ENST00000449500 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
MHENCR-202ENST00000449500 ARHGEF11O15085 1522 aa31.56■■■□□ 2.64
MHENCR-202ENST00000449500 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.63
MHENCR-202ENST00000449500 CLASP1Q7Z460 1538 aa31.49■■■□□ 2.63
MHENCR-202ENST00000449500 ADAMTS12P58397 1594 aa31.47■■■□□ 2.63
MHENCR-202ENST00000449500 FHAD1B1AJZ9 1412 aa31.43■■■□□ 2.62
MHENCR-202ENST00000449500 GRIN2AQ12879 1464 aa31.42■■■□□ 2.62
MHENCR-202ENST00000449500 KIF27Q86VH2 1401 aa31.33■■■□□ 2.61
MHENCR-202ENST00000449500 NUP160Q12769 1436 aa31.28■■■□□ 2.6
MHENCR-202ENST00000449500 CYB5RLQ6IPT4 315 aa31.28■■■□□ 2.6
MHENCR-202ENST00000449500 ARAP1Q96P48 1450 aa31.27■■■□□ 2.6
MHENCR-202ENST00000449500 CEP170Q5SW79 1584 aa31.25■■■□□ 2.59
MHENCR-202ENST00000449500 CUL7Q14999 1698 aa31.19■■■□□ 2.58
MHENCR-202ENST00000449500 IGF1RP08069 1367 aa31.18■■■□□ 2.58
MHENCR-202ENST00000449500 SHROOM2Q13796 1616 aa31.09■■■□□ 2.57
MHENCR-202ENST00000449500 RUSC2Q8N2Y8 1516 aa31.02■■■□□ 2.56
MHENCR-202ENST00000449500 CARMIL1Q5VZK9 1371 aa31.02■■■□□ 2.56
MHENCR-202ENST00000449500 JPH4Q96JJ6 628 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms