RNA–Protein interactions for RNA: ENST00000552037.1

ZFC3H1-211, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 1 (best) BASIC

Gene ZFC3H1, Length 1,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-211ENST00000552037 NISCHQ9Y2I1 1504 aa43.77■■■■■ 4.6
ZFC3H1-211ENST00000552037 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
ZFC3H1-211ENST00000552037 ABCC9O60706 1549 aa37.86■■■■□ 3.65
ZFC3H1-211ENST00000552037 DCAF8L2P0C7V8 631 aa36.69■■■■□ 3.46
ZFC3H1-211ENST00000552037 ZCCHC6Q5VYS8 1495 aaKnown RBP36.49■■■■□ 3.43
ZFC3H1-211ENST00000552037 NACADO15069 1562 aa36.46■■■■□ 3.43
ZFC3H1-211ENST00000552037 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
ZFC3H1-211ENST00000552037 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
ZFC3H1-211ENST00000552037 DCAF1Q9Y4B6 1507 aa36.24■■■■□ 3.39
ZFC3H1-211ENST00000552037 DNAJC5BQ9UF47 199 aa35.73■■■■□ 3.31
ZFC3H1-211ENST00000552037 UNC13AQ9UPW8 1703 aa35.4■■■■□ 3.26
ZFC3H1-211ENST00000552037 SCRIBQ14160 1630 aa35.38■■■■□ 3.25
ZFC3H1-211ENST00000552037 PABPN1Q86U42 306 aaKnown RBP eCLIP35.38■■■■□ 3.25
ZFC3H1-211ENST00000552037 BICRAQ9NZM4 1560 aa35.2■■■■□ 3.23
ZFC3H1-211ENST00000552037 SHROOM4Q9ULL8 1493 aa34.98■■■■□ 3.19
ZFC3H1-211ENST00000552037 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.08
ZFC3H1-211ENST00000552037 CC2D2AQ9P2K1 1620 aa34.23■■■■□ 3.07
ZFC3H1-211ENST00000552037 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.04
ZFC3H1-211ENST00000552037 BAZ1AQ9NRL2 1556 aaPredicted RBP33.94■■■■□ 3.02
ZFC3H1-211ENST00000552037 SMARCA4P51532 1647 aa33.87■■■■□ 3.01
ZFC3H1-211ENST00000552037 MROH2BQ7Z745 1585 aa33.71■■■□□ 2.99
ZFC3H1-211ENST00000552037 ATAD2BQ9ULI0 1458 aa33.68■■■□□ 2.98
ZFC3H1-211ENST00000552037 SMARCA2P51531 1590 aa33.68■■■□□ 2.98
ZFC3H1-211ENST00000552037 NCAPD3P42695 1498 aa33.65■■■□□ 2.98
ZFC3H1-211ENST00000552037 PEG3Q9GZU2 1588 aa33.54■■■□□ 2.96
ZFC3H1-211ENST00000552037 RSF1Q96T23 1441 aaPredicted RBP33.47■■■□□ 2.95
ZFC3H1-211ENST00000552037 HMGXB3Q12766 1538 aa33.46■■■□□ 2.95
ZFC3H1-211ENST00000552037 BAZ1BQ9UIG0 1483 aaKnown RBP33.45■■■□□ 2.95
ZFC3H1-211ENST00000552037 WIZO95785 1651 aa33.33■■■□□ 2.93
ZFC3H1-211ENST00000552037 TOP2AP11388 1531 aaKnown RBP33.04■■■□□ 2.88
ZFC3H1-211ENST00000552037 SUPT5HO00267 1087 aaKnown RBP32.94■■■□□ 2.86
ZFC3H1-211ENST00000552037 DNAJC5Q9H3Z4 198 aa32.78■■■□□ 2.84
ZFC3H1-211ENST00000552037 CADPSQ9ULU8 1353 aa32.73■■■□□ 2.83
ZFC3H1-211ENST00000552037 LAMC3Q9Y6N6 1575 aa32.69■■■□□ 2.82
ZFC3H1-211ENST00000552037 NESP48681 1621 aa32.69■■■□□ 2.82
ZFC3H1-211ENST00000552037 CCDC88BA6NC98 1476 aa32.68■■■□□ 2.82
ZFC3H1-211ENST00000552037 CUX2O14529 1486 aa32.62■■■□□ 2.81
ZFC3H1-211ENST00000552037 ERCC6Q03468 1493 aa32.6■■■□□ 2.81
ZFC3H1-211ENST00000552037 PDS5BQ9NTI5 1447 aa32.57■■■□□ 2.8
ZFC3H1-211ENST00000552037 CFTRP13569 1480 aa32.53■■■□□ 2.8
ZFC3H1-211ENST00000552037 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
ZFC3H1-211ENST00000552037 THOC2Q8NI27 1593 aaKnown RBP32.26■■■□□ 2.75
ZFC3H1-211ENST00000552037 CEP164Q9UPV0 1460 aa32.25■■■□□ 2.75
ZFC3H1-211ENST00000552037 KIF21AQ7Z4S6 1674 aa32.24■■■□□ 2.75
ZFC3H1-211ENST00000552037 PRDM2Q13029 1718 aa32.16■■■□□ 2.74
ZFC3H1-211ENST00000552037 MRC2Q9UBG0 1479 aa32.14■■■□□ 2.74
ZFC3H1-211ENST00000552037 WDR62O43379 1518 aa31.97■■■□□ 2.71
ZFC3H1-211ENST00000552037 ABCC8Q09428 1581 aa31.91■■■□□ 2.7
ZFC3H1-211ENST00000552037 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
ZFC3H1-211ENST00000552037 TOPBP1Q92547 1522 aa31.79■■■□□ 2.68
ZFC3H1-211ENST00000552037 DNMBPQ6XZF7 1577 aa31.76■■■□□ 2.68
ZFC3H1-211ENST00000552037 CUX1P39880 1505 aa31.6■■■□□ 2.65
ZFC3H1-211ENST00000552037 WRNQ14191 1432 aaPredicted RBP eCLIP31.59■■■□□ 2.65
ZFC3H1-211ENST00000552037 IFT140Q96RY7 1462 aa31.58■■■□□ 2.65
ZFC3H1-211ENST00000552037 POLA1P09884 1462 aaPredicted RBP31.53■■■□□ 2.64
ZFC3H1-211ENST00000552037 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
ZFC3H1-211ENST00000552037 SOGA1O94964 1423 aa31.49■■■□□ 2.63
ZFC3H1-211ENST00000552037 TOP2BQ02880 1626 aa31.41■■■□□ 2.62
ZFC3H1-211ENST00000552037 RAD54L2Q9Y4B4 1467 aa31.4■■■□□ 2.62
ZFC3H1-211ENST00000552037 SYNJ1O43426 1573 aa31.37■■■□□ 2.61
ZFC3H1-211ENST00000552037 BIVM-ERCC5R4GMW8 1640 aa31.37■■■□□ 2.61
ZFC3H1-211ENST00000552037 TARBP1Q13395 1621 aaKnown RBP31.35■■■□□ 2.61
ZFC3H1-211ENST00000552037 ZNF608Q9ULD9 1512 aaPredicted RBP31.33■■■□□ 2.61
ZFC3H1-211ENST00000552037 TRIM41Q8WV44 630 aa31.28■■■□□ 2.6
ZFC3H1-211ENST00000552037 TDRD9Q8NDG6 1382 aaKnown RBP31.26■■■□□ 2.59
ZFC3H1-211ENST00000552037 AQRO60306 1485 aaKnown RBP eCLIP31.25■■■□□ 2.598e-7■■■□□ 16.1
ZFC3H1-211ENST00000552037 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
ZFC3H1-211ENST00000552037 WDR97A6NE52 1622 aa31.2■■■□□ 2.58
ZFC3H1-211ENST00000552037 EIF4G3O43432 1585 aaKnown RBP31.19■■■□□ 2.58
ZFC3H1-211ENST00000552037 GAPVD1Q14C86 1478 aa31.11■■■□□ 2.57
ZFC3H1-211ENST00000552037 GRIN2BQ13224 1484 aa31.07■■■□□ 2.56
ZFC3H1-211ENST00000552037 OSCARQ8IYS5 282 aa31.02■■■□□ 2.56
ZFC3H1-211ENST00000552037 ABCA5Q8WWZ7 1642 aa30.99■■■□□ 2.55
ZFC3H1-211ENST00000552037 KIF27Q86VH2 1401 aa30.96■■■□□ 2.55
ZFC3H1-211ENST00000552037 FBLN2P98095 1184 aa30.95■■■□□ 2.55
ZFC3H1-211ENST00000552037 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.54
ZFC3H1-211ENST00000552037 SNAPC4Q5SXM2 1469 aa30.94■■■□□ 2.54
ZFC3H1-211ENST00000552037 CHMP7Q8WUX9 453 aaPredicted RBP30.92■■■□□ 2.54
ZFC3H1-211ENST00000552037 PBRM1Q86U86 1689 aa30.89■■■□□ 2.53
ZFC3H1-211ENST00000552037 ERICH3Q5RHP9 1530 aa30.86■■■□□ 2.53
ZFC3H1-211ENST00000552037 CHIC1Q5VXU3 224 aa30.85■■■□□ 2.53
ZFC3H1-211ENST00000552037 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
ZFC3H1-211ENST00000552037 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
ZFC3H1-211ENST00000552037 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
ZFC3H1-211ENST00000552037 SYNJ2O15056 1496 aa30.82■■■□□ 2.52
ZFC3H1-211ENST00000552037 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
ZFC3H1-211ENST00000552037 IGF1RP08069 1367 aa30.76■■■□□ 2.52
ZFC3H1-211ENST00000552037 CHD1O14646 1710 aa30.71■■■□□ 2.51
ZFC3H1-211ENST00000552037 ADAMTS12P58397 1594 aa30.69■■■□□ 2.5
ZFC3H1-211ENST00000552037 ARHGEF11O15085 1522 aa30.67■■■□□ 2.5
ZFC3H1-211ENST00000552037 GRIN2AQ12879 1464 aa30.64■■■□□ 2.49
ZFC3H1-211ENST00000552037 CARMIL1Q5VZK9 1371 aa30.63■■■□□ 2.49
ZFC3H1-211ENST00000552037 RUSC2Q8N2Y8 1516 aa30.62■■■□□ 2.49
ZFC3H1-211ENST00000552037 CUL7Q14999 1698 aa30.6■■■□□ 2.49
ZFC3H1-211ENST00000552037 EEA1Q15075 1411 aa30.55■■■□□ 2.48
ZFC3H1-211ENST00000552037 CSRNP3Q8WYN3 585 aa30.51■■■□□ 2.48
ZFC3H1-211ENST00000552037 NUP160Q12769 1436 aa30.48■■■□□ 2.47
ZFC3H1-211ENST00000552037 FAM9AQ8IZU1 332 aaPredicted RBP30.44■■■□□ 2.46
ZFC3H1-211ENST00000552037 RAPGEF2Q9Y4G8 1499 aa30.44■■■□□ 2.46
ZFC3H1-211ENST00000552037 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms