Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.26■■■□□ 2.6
ARFGEF1Q9Y6D6 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.26■■■□□ 2.6
ARFGEF1Q9Y6D6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
ARFGEF1Q9Y6D6 AC074183.2-201ENST00000623112 922 ntBASIC31.26■■■□□ 2.6
ARFGEF1Q9Y6D6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
ARFGEF1Q9Y6D6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
ARFGEF1Q9Y6D6 SMPD5-203ENST00000639008 1464 ntBASIC31.25■■■□□ 2.59
ARFGEF1Q9Y6D6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.25■■■□□ 2.59
ARFGEF1Q9Y6D6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.25■■■□□ 2.59
ARFGEF1Q9Y6D6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ARFGEF1Q9Y6D6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.25■■■□□ 2.59
ARFGEF1Q9Y6D6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ARFGEF1Q9Y6D6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.24■■■□□ 2.59
ARFGEF1Q9Y6D6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ARFGEF1Q9Y6D6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
ARFGEF1Q9Y6D6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.24■■■□□ 2.59
ARFGEF1Q9Y6D6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ARFGEF1Q9Y6D6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
ARFGEF1Q9Y6D6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.21■■■□□ 2.59
ARFGEF1Q9Y6D6 AC139795.1-202ENST00000500444 432 ntBASIC31.21■■■□□ 2.59
ARFGEF1Q9Y6D6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.21■■■□□ 2.59
ARFGEF1Q9Y6D6 AC103724.3-201ENST00000564481 992 ntBASIC31.21■■■□□ 2.59
ARFGEF1Q9Y6D6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
ARFGEF1Q9Y6D6 AC103834.1-201ENST00000520383 144 ntBASIC31.21■■■□□ 2.59
ARFGEF1Q9Y6D6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
ARFGEF1Q9Y6D6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
ARFGEF1Q9Y6D6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
ARFGEF1Q9Y6D6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
ARFGEF1Q9Y6D6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ARFGEF1Q9Y6D6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
ARFGEF1Q9Y6D6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ARFGEF1Q9Y6D6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ARFGEF1Q9Y6D6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
ARFGEF1Q9Y6D6 MIR935-201ENST00000401179 91 ntBASIC31.19■■■□□ 2.58
ARFGEF1Q9Y6D6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.19■■■□□ 2.58
ARFGEF1Q9Y6D6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.19■■■□□ 2.58
ARFGEF1Q9Y6D6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.19■■■□□ 2.58
ARFGEF1Q9Y6D6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.19■■■□□ 2.58
ARFGEF1Q9Y6D6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.18■■■□□ 2.58
ARFGEF1Q9Y6D6 MIR6765-201ENST00000614092 87 ntBASIC31.18■■■□□ 2.58
ARFGEF1Q9Y6D6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
ARFGEF1Q9Y6D6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.18■■■□□ 2.58
ARFGEF1Q9Y6D6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ARFGEF1Q9Y6D6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
ARFGEF1Q9Y6D6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
ARFGEF1Q9Y6D6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.17■■■□□ 2.58
ARFGEF1Q9Y6D6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ARFGEF1Q9Y6D6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
ARFGEF1Q9Y6D6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.17■■■□□ 2.58
ARFGEF1Q9Y6D6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
ARFGEF1Q9Y6D6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.16■■■□□ 2.58
ARFGEF1Q9Y6D6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.16■■■□□ 2.58
ARFGEF1Q9Y6D6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ARFGEF1Q9Y6D6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.15■■■□□ 2.58
ARFGEF1Q9Y6D6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ARFGEF1Q9Y6D6 YBX1P4-201ENST00000392794 808 ntBASIC31.14■■■□□ 2.58
ARFGEF1Q9Y6D6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.14■■■□□ 2.58
ARFGEF1Q9Y6D6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARFGEF1Q9Y6D6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
ARFGEF1Q9Y6D6 BHLHE23-202ENST00000612929 1109 ntBASIC31.14■■■□□ 2.58
ARFGEF1Q9Y6D6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARFGEF1Q9Y6D6 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.14■■■□□ 2.58
ARFGEF1Q9Y6D6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARFGEF1Q9Y6D6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
ARFGEF1Q9Y6D6 AL356441.2-201ENST00000443009 864 ntBASIC31.12■■■□□ 2.57
ARFGEF1Q9Y6D6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.12■■■□□ 2.57
ARFGEF1Q9Y6D6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.11■■■□□ 2.57
ARFGEF1Q9Y6D6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
ARFGEF1Q9Y6D6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
ARFGEF1Q9Y6D6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.11■■■□□ 2.57
ARFGEF1Q9Y6D6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARFGEF1Q9Y6D6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARFGEF1Q9Y6D6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.1■■■□□ 2.57
ARFGEF1Q9Y6D6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
ARFGEF1Q9Y6D6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ARFGEF1Q9Y6D6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.09■■■□□ 2.57
ARFGEF1Q9Y6D6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
ARFGEF1Q9Y6D6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ARFGEF1Q9Y6D6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.08■■■□□ 2.57
ARFGEF1Q9Y6D6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
ARFGEF1Q9Y6D6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.07■■■□□ 2.56
ARFGEF1Q9Y6D6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.07■■■□□ 2.56
ARFGEF1Q9Y6D6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ARFGEF1Q9Y6D6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ARFGEF1Q9Y6D6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ARFGEF1Q9Y6D6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ARFGEF1Q9Y6D6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
ARFGEF1Q9Y6D6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.05■■■□□ 2.56
ARFGEF1Q9Y6D6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ARFGEF1Q9Y6D6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.04■■■□□ 2.56
ARFGEF1Q9Y6D6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ARFGEF1Q9Y6D6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.04■■■□□ 2.56
ARFGEF1Q9Y6D6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ARFGEF1Q9Y6D6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
ARFGEF1Q9Y6D6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.03■■■□□ 2.56
ARFGEF1Q9Y6D6 AL135925.1-201ENST00000605920 1701 ntBASIC31.03■■■□□ 2.56
ARFGEF1Q9Y6D6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
ARFGEF1Q9Y6D6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ARFGEF1Q9Y6D6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.02■■■□□ 2.56
ARFGEF1Q9Y6D6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms