Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 AC120057.4-201ENST00000624722 1615 ntBASIC10.73□□□□□ -0.69
MACF1Q9UPN3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 AC105265.2-201ENST00000467189 838 ntBASIC10.72□□□□□ -0.69
MACF1Q9UPN3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MACF1Q9UPN3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
MACF1Q9UPN3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
MACF1Q9UPN3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
MACF1Q9UPN3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
MACF1Q9UPN3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
MACF1Q9UPN3 LONRF2P2-201ENST00000439212 571 ntBASIC10.71□□□□□ -0.69
MACF1Q9UPN3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC10.71□□□□□ -0.69
MACF1Q9UPN3 SUDS3P1-201ENST00000505831 966 ntBASIC10.71□□□□□ -0.7
MACF1Q9UPN3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC10.71□□□□□ -0.7
MACF1Q9UPN3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC10.7□□□□□ -0.7
MACF1Q9UPN3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC10.7□□□□□ -0.7
MACF1Q9UPN3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
MACF1Q9UPN3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC10.7□□□□□ -0.7
MACF1Q9UPN3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
MACF1Q9UPN3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
MACF1Q9UPN3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
MACF1Q9UPN3 RARRES2P11-201ENST00000635158 484 ntBASIC10.69□□□□□ -0.7
MACF1Q9UPN3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC10.69□□□□□ -0.7
MACF1Q9UPN3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC10.69□□□□□ -0.7
MACF1Q9UPN3 MIR6821-201ENST00000617625 74 ntBASIC10.69□□□□□ -0.7
MACF1Q9UPN3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MACF1Q9UPN3 MIR219A2-201ENST00000608502 1504 ntBASIC10.69□□□□□ -0.7
MACF1Q9UPN3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC10.69□□□□□ -0.7
MACF1Q9UPN3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
MACF1Q9UPN3 REST-210ENST00000638187 1334 ntTSL 5 BASIC10.69□□□□□ -0.7
MACF1Q9UPN3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MACF1Q9UPN3 UNC93B8-201ENST00000511903 705 ntBASIC10.68□□□□□ -0.7
MACF1Q9UPN3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
MACF1Q9UPN3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC10.68□□□□□ -0.7
MACF1Q9UPN3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC10.67□□□□□ -0.7
MACF1Q9UPN3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC10.67□□□□□ -0.7
MACF1Q9UPN3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC10.66□□□□□ -0.7
MACF1Q9UPN3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
MACF1Q9UPN3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC10.66□□□□□ -0.7
MACF1Q9UPN3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
MACF1Q9UPN3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC10.66□□□□□ -0.7
MACF1Q9UPN3 ID1-201ENST00000376105 1233 ntBASIC10.66□□□□□ -0.7
MACF1Q9UPN3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 MED25-210ENST00000612854 801 ntTSL 5 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 MED25-214ENST00000622402 642 ntTSL 5 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
MACF1Q9UPN3 SRR-208ENST00000576848 588 ntTSL 4 BASIC10.65□□□□□ -0.71
MACF1Q9UPN3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
MACF1Q9UPN3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
MACF1Q9UPN3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC10.64□□□□□ -0.71
MACF1Q9UPN3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms