Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CYSTM1Q9H1C7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.86□□□□□ -0.03
CYSTM1Q9H1C7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CYSTM1Q9H1C7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CYSTM1Q9H1C7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.84□□□□□ -0.03
CYSTM1Q9H1C7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CYSTM1Q9H1C7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CYSTM1Q9H1C7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CYSTM1Q9H1C7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CYSTM1Q9H1C7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CYSTM1Q9H1C7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CYSTM1Q9H1C7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CYSTM1Q9H1C7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.83□□□□□ -0.03
CYSTM1Q9H1C7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CYSTM1Q9H1C7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CYSTM1Q9H1C7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CYSTM1Q9H1C7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CYSTM1Q9H1C7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.83□□□□□ -0.04
CYSTM1Q9H1C7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CYSTM1Q9H1C7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.82□□□□□ -0.04
CYSTM1Q9H1C7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYSTM1Q9H1C7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC14.82□□□□□ -0.04
CYSTM1Q9H1C7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYSTM1Q9H1C7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYSTM1Q9H1C7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYSTM1Q9H1C7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.81□□□□□ -0.04
CYSTM1Q9H1C7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CYSTM1Q9H1C7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYSTM1Q9H1C7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CYSTM1Q9H1C7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.81□□□□□ -0.04
CYSTM1Q9H1C7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYSTM1Q9H1C7 ERN1-208ENST00000606895 2068 ntBASIC14.8□□□□□ -0.04
CYSTM1Q9H1C7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC14.8□□□□□ -0.04
CYSTM1Q9H1C7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CYSTM1Q9H1C7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CYSTM1Q9H1C7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CYSTM1Q9H1C7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CYSTM1Q9H1C7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CYSTM1Q9H1C7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CYSTM1Q9H1C7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CYSTM1Q9H1C7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC14.79□□□□□ -0.04
CYSTM1Q9H1C7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CYSTM1Q9H1C7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CYSTM1Q9H1C7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC14.77□□□□□ -0.04
CYSTM1Q9H1C7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC14.77□□□□□ -0.04
CYSTM1Q9H1C7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC14.76□□□□□ -0.05
CYSTM1Q9H1C7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CYSTM1Q9H1C7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CYSTM1Q9H1C7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CYSTM1Q9H1C7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC14.76□□□□□ -0.05
CYSTM1Q9H1C7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CYSTM1Q9H1C7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CYSTM1Q9H1C7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC14.75□□□□□ -0.05
CYSTM1Q9H1C7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CYSTM1Q9H1C7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC14.75□□□□□ -0.05
CYSTM1Q9H1C7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CYSTM1Q9H1C7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CYSTM1Q9H1C7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CYSTM1Q9H1C7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 ABCB10P4-201ENST00000566803 2184 ntBASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CYSTM1Q9H1C7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CYSTM1Q9H1C7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CYSTM1Q9H1C7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CYSTM1Q9H1C7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC14.73□□□□□ -0.05
CYSTM1Q9H1C7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CYSTM1Q9H1C7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CYSTM1Q9H1C7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CYSTM1Q9H1C7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms