Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC41.97■■■■■ 4.31
SNAPC4Q5SXM2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC41.96■■■■■ 4.31
SNAPC4Q5SXM2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC41.96■■■■■ 4.31
SNAPC4Q5SXM2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC41.96■■■■■ 4.31
SNAPC4Q5SXM2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC41.95■■■■■ 4.31
SNAPC4Q5SXM2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC41.95■■■■■ 4.31
SNAPC4Q5SXM2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC41.95■■■■■ 4.31
SNAPC4Q5SXM2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC41.95■■■■■ 4.31
SNAPC4Q5SXM2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC41.94■■■■■ 4.3
SNAPC4Q5SXM2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC41.94■■■■■ 4.3
SNAPC4Q5SXM2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC41.94■■■■■ 4.3
SNAPC4Q5SXM2 AC074183.2-201ENST00000623112 922 ntBASIC41.94■■■■■ 4.3
SNAPC4Q5SXM2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC41.94■■■■■ 4.3
SNAPC4Q5SXM2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC41.94■■■■■ 4.3
SNAPC4Q5SXM2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC41.93■■■■■ 4.3
SNAPC4Q5SXM2 BHLHE23-202ENST00000612929 1109 ntBASIC41.93■■■■■ 4.3
SNAPC4Q5SXM2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC41.93■■■■■ 4.3
SNAPC4Q5SXM2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC41.93■■■■■ 4.3
SNAPC4Q5SXM2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC41.92■■■■■ 4.3
SNAPC4Q5SXM2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC41.92■■■■■ 4.3
SNAPC4Q5SXM2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC41.92■■■■■ 4.3
SNAPC4Q5SXM2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC41.92■■■■■ 4.3
SNAPC4Q5SXM2 AC093536.1-201ENST00000569153 554 ntBASIC41.92■■■■■ 4.3
SNAPC4Q5SXM2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC41.91■■■■■ 4.3
SNAPC4Q5SXM2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC41.91■■■■■ 4.3
SNAPC4Q5SXM2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC41.9■■■■■ 4.3
SNAPC4Q5SXM2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC41.9■■■■■ 4.3
SNAPC4Q5SXM2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC41.89■■■■■ 4.3
SNAPC4Q5SXM2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC41.88■■■■■ 4.29
SNAPC4Q5SXM2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC41.88■■■■■ 4.29
SNAPC4Q5SXM2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC41.87■■■■■ 4.29
SNAPC4Q5SXM2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC41.86■■■■■ 4.29
SNAPC4Q5SXM2 MIR935-201ENST00000401179 91 ntBASIC41.86■■■■■ 4.29
SNAPC4Q5SXM2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC41.86■■■■■ 4.29
SNAPC4Q5SXM2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC41.86■■■■■ 4.29
SNAPC4Q5SXM2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC41.85■■■■■ 4.29
SNAPC4Q5SXM2 YBX1P4-201ENST00000392794 808 ntBASIC41.85■■■■■ 4.29
SNAPC4Q5SXM2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC41.85■■■■■ 4.29
SNAPC4Q5SXM2 AL356441.2-201ENST00000443009 864 ntBASIC41.85■■■■■ 4.29
SNAPC4Q5SXM2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC41.85■■■■■ 4.29
SNAPC4Q5SXM2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC41.85■■■■■ 4.29
SNAPC4Q5SXM2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC41.84■■■■■ 4.29
SNAPC4Q5SXM2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC41.84■■■■■ 4.29
SNAPC4Q5SXM2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC41.84■■■■■ 4.29
SNAPC4Q5SXM2 MIR4508-201ENST00000584178 70 ntBASIC41.84■■■■■ 4.29
SNAPC4Q5SXM2 AC139795.1-202ENST00000500444 432 ntBASIC41.83■■■■■ 4.29
SNAPC4Q5SXM2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC41.83■■■■■ 4.29
SNAPC4Q5SXM2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC41.82■■■■■ 4.29
SNAPC4Q5SXM2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC41.82■■■■■ 4.28
SNAPC4Q5SXM2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC41.81■■■■■ 4.28
SNAPC4Q5SXM2 MIR6765-201ENST00000614092 87 ntBASIC41.81■■■■■ 4.28
SNAPC4Q5SXM2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC41.81■■■■■ 4.28
SNAPC4Q5SXM2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC41.81■■■■■ 4.28
SNAPC4Q5SXM2 AL135925.1-201ENST00000605920 1701 ntBASIC41.8■■■■■ 4.28
SNAPC4Q5SXM2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC41.79■■■■■ 4.28
SNAPC4Q5SXM2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC41.79■■■■■ 4.28
SNAPC4Q5SXM2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC41.79■■■■■ 4.28
SNAPC4Q5SXM2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC41.79■■■■■ 4.28
SNAPC4Q5SXM2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC41.79■■■■■ 4.28
SNAPC4Q5SXM2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC41.78■■■■■ 4.28
SNAPC4Q5SXM2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC41.77■■■■■ 4.28
SNAPC4Q5SXM2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC41.77■■■■■ 4.28
SNAPC4Q5SXM2 AL359258.2-201ENST00000564063 1566 ntBASIC41.76■■■■■ 4.28
SNAPC4Q5SXM2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC41.76■■■■■ 4.28
SNAPC4Q5SXM2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC41.76■■■■■ 4.28
SNAPC4Q5SXM2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC41.76■■■■■ 4.28
SNAPC4Q5SXM2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC41.76■■■■■ 4.27
SNAPC4Q5SXM2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC41.75■■■■■ 4.27
SNAPC4Q5SXM2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC41.75■■■■■ 4.27
SNAPC4Q5SXM2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC41.75■■■■■ 4.27
SNAPC4Q5SXM2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC41.75■■■■■ 4.27
SNAPC4Q5SXM2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC41.74■■■■■ 4.27
SNAPC4Q5SXM2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC41.74■■■■■ 4.27
SNAPC4Q5SXM2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC41.74■■■■■ 4.27
SNAPC4Q5SXM2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC41.73■■■■■ 4.27
SNAPC4Q5SXM2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC41.73■■■■■ 4.27
SNAPC4Q5SXM2 AC103724.3-201ENST00000564481 992 ntBASIC41.73■■■■■ 4.27
SNAPC4Q5SXM2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC41.73■■■■■ 4.27
SNAPC4Q5SXM2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC41.73■■■■■ 4.27
SNAPC4Q5SXM2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC41.73■■■■■ 4.27
SNAPC4Q5SXM2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC41.72■■■■■ 4.27
SNAPC4Q5SXM2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC41.72■■■■■ 4.27
SNAPC4Q5SXM2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC41.72■■■■■ 4.27
SNAPC4Q5SXM2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC41.72■■■■■ 4.27
SNAPC4Q5SXM2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC41.71■■■■■ 4.27
SNAPC4Q5SXM2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC41.71■■■■■ 4.27
SNAPC4Q5SXM2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC41.7■■■■■ 4.27
SNAPC4Q5SXM2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC41.7■■■■■ 4.27
SNAPC4Q5SXM2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC41.7■■■■■ 4.27
SNAPC4Q5SXM2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC41.7■■■■■ 4.27
SNAPC4Q5SXM2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC41.69■■■■■ 4.26
SNAPC4Q5SXM2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC41.69■■■■■ 4.26
SNAPC4Q5SXM2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC41.68■■■■■ 4.26
SNAPC4Q5SXM2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC41.68■■■■■ 4.26
SNAPC4Q5SXM2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC41.68■■■■■ 4.26
SNAPC4Q5SXM2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC41.67■■■■■ 4.26
SNAPC4Q5SXM2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC41.67■■■■■ 4.26
SNAPC4Q5SXM2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC41.66■■■■■ 4.26
SNAPC4Q5SXM2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC41.66■■■■■ 4.26
SNAPC4Q5SXM2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC41.66■■■■■ 4.26
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms