Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 RRP36YOR287C 903 nt7.73□□□□□ -1.17
TY1A-MR1Q04215 SNX3YOR357C 489 nt7.73□□□□□ -1.17
TY1A-MR1Q04215 WHI4YDL224C 1950 nt7.73□□□□□ -1.17
TY1A-MR1Q04215 MUM3YOR298W 1440 nt7.72□□□□□ -1.17
TY1A-MR1Q04215 SAC7YDR389W 1965 nt7.72□□□□□ -1.17
TY1A-MR1Q04215 PEF1YGR058W 1008 nt7.72□□□□□ -1.17
TY1A-MR1Q04215 YJL047C-AYJL047C-A 135 nt7.72□□□□□ -1.17
TY1A-MR1Q04215 CDC8YJR057W 651 nt7.72□□□□□ -1.17
TY1A-MR1Q04215 MRPL15YLR312W-A 762 nt7.72□□□□□ -1.17
TY1A-MR1Q04215 CBP6YBR120C 489 nt7.72□□□□□ -1.17
TY1A-MR1Q04215 TPS1YBR126C 1488 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 PCL9YDL179W 915 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 INH1YDL181W 258 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 YGL218WYGL218W 651 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 POP6YGR030C 477 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 YHR140WYHR140W 720 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 ERG20YJL167W 1059 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 HYM1YKL189W 1200 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 BUD21YOR078W 645 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 GPI18YBR004C 1302 nt7.71□□□□□ -1.18
TY1A-MR1Q04215 RKM4YDR257C 1485 nt7.7□□□□□ -1.18
TY1A-MR1Q04215 YOR020W-AYOR020W-A 273 nt7.7□□□□□ -1.18
TY1A-MR1Q04215 SLD7YOR060C 774 nt7.7□□□□□ -1.18
TY1A-MR1Q04215 HEM14YER014W 1620 nt7.7□□□□□ -1.18
TY1A-MR1Q04215 LEU4YNL104C 1860 nt7.69□□□□□ -1.18
TY1A-MR1Q04215 CAB5YDR196C 726 nt7.69□□□□□ -1.18
TY1A-MR1Q04215 YHL045WYHL045W 348 nt7.69□□□□□ -1.18
TY1A-MR1Q04215 WSS1YHR134W 810 nt7.69□□□□□ -1.18
TY1A-MR1Q04215 RPI1YIL119C 1224 nt7.69□□□□□ -1.18
TY1A-MR1Q04215 RIB3YDR487C 627 nt7.68□□□□□ -1.18
TY1A-MR1Q04215 YKR051WYKR051W 1257 nt7.68□□□□□ -1.18
TY1A-MR1Q04215 ADE1YAR015W 921 nt7.68□□□□□ -1.18
TY1A-MR1Q04215 YOL050CYOL050C 321 nt7.68□□□□□ -1.18
TY1A-MR1Q04215 TFB6YOR352W 1032 nt7.68□□□□□ -1.18
TY1A-MR1Q04215 LOA1YPR139C 903 nt7.68□□□□□ -1.18
TY1A-MR1Q04215 CHL4YDR254W 1377 nt7.68□□□□□ -1.18
TY1A-MR1Q04215 YDR222WYDR222W 1248 nt7.67□□□□□ -1.18
TY1A-MR1Q04215 YAL064WYAL064W 285 nt7.67□□□□□ -1.18
TY1A-MR1Q04215 YNL217WYNL217W 981 nt7.67□□□□□ -1.18
TY1A-MR1Q04215 SRL4YPL033C 846 nt7.67□□□□□ -1.18
TY1A-MR1Q04215 TVP23YDR084C 600 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 YFL012WYFL012W 447 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 YHR175W-AYHR175W-A 150 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 EST3YIL009C-A 546 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 YJL055WYJL055W 738 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 LOT5YKL183W 921 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 RNH1YMR234W 1047 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 TMA23YMR269W 636 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 GCN5YGR252W 1320 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 ATG23YLR431C 1362 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 YMR265CYMR265C 1386 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 SSU1YPL092W 1377 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 DRN1YGR093W 1524 nt7.66□□□□□ -1.18
TY1A-MR1Q04215 CDC10YCR002C 969 nt7.65□□□□□ -1.18
TY1A-MR1Q04215 CIT2YCR005C 1383 nt7.65□□□□□ -1.18
TY1A-MR1Q04215 INM1YHR046C 888 nt7.65□□□□□ -1.18
TY1A-MR1Q04215 YLR222C-AYLR222C-A 231 nt7.65□□□□□ -1.18
TY1A-MR1Q04215 ERV25YML012W 636 nt7.65□□□□□ -1.18
TY1A-MR1Q04215 PPA2YMR267W 933 nt7.65□□□□□ -1.18
TY1A-MR1Q04215 PHA2YNL316C 1005 nt7.65□□□□□ -1.18
TY1A-MR1Q04215 RRT8YOL048C 1029 nt7.65□□□□□ -1.18
TY1A-MR1Q04215 YOR062CYOR062C 807 nt7.65□□□□□ -1.18
TY1A-MR1Q04215 MAS1YLR163C 1389 nt7.64□□□□□ -1.19
TY1A-MR1Q04215 MTC7YEL033W 420 nt7.64□□□□□ -1.19
TY1A-MR1Q04215 VPS68YOL129W 555 nt7.64□□□□□ -1.19
TY1A-MR1Q04215 YOL162WYOL162W 648 nt7.64□□□□□ -1.19
TY1A-MR1Q04215 YDC1YPL087W 954 nt7.64□□□□□ -1.19
TY1A-MR1Q04215 YPR153WYPR153W 423 nt7.64□□□□□ -1.19
TY1A-MR1Q04215 FET5YFL041W 1869 nt7.64□□□□□ -1.19
TY1A-MR1Q04215 PRP9YDL030W 1593 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 LSB3YFR024C-A 1380 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 HXT12YIL170W 1374 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 HPM1YIL110W 1134 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 YKL202WYKL202W 582 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 YLL047WYLL047W 384 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 SEN2YLR105C 1134 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 YLR111WYLR111W 333 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 YML090WYML090W 387 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 YNR064CYNR064C 873 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 POC4YPL144W 447 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 ARA1YBR149W 1035 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 MEX67YPL169C 1800 nt7.63□□□□□ -1.19
TY1A-MR1Q04215 NPP2YEL016C 1482 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 YCR006CYCR006C 474 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)BtD(GUC)B 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)DtD(GUC)D 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)G1tD(GUC)G1 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 HTB1YDR224C 396 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)G2tD(GUC)G2 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)I1tD(GUC)I1 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)I2tD(GUC)I2 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)J1tD(GUC)J1 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)J2tD(GUC)J2 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)J3tD(GUC)J3 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)J4tD(GUC)J4 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)KtD(GUC)K 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)L1tD(GUC)L1 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)L2tD(GUC)L2 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)MtD(GUC)M 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tD(GUC)OtD(GUC)O 72 nt7.62□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms