Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 LIP5YOR196C 1245 nt8.09□□□□□ -1.11
HDA1P53973 RTC2YBR147W 891 nt8.09□□□□□ -1.11
HDA1P53973 YPQ2YDR352W 954 nt8.08□□□□□ -1.12
HDA1P53973 SUF3tG(CCC)D 72 nt8.07□□□□□ -1.12
HDA1P53973 LDB7YBL006C 543 nt8.07□□□□□ -1.12
HDA1P53973 GET4YOR164C 939 nt8.07□□□□□ -1.12
HDA1P53973 YPL264CYPL264C 1062 nt8.07□□□□□ -1.12
HDA1P53973 TOM71YHR117W 1920 nt8.06□□□□□ -1.12
HDA1P53973 GNA1YFL017C 480 nt8.06□□□□□ -1.12
HDA1P53973 UFD1YGR048W 1086 nt8.06□□□□□ -1.12
HDA1P53973 YOR111WYOR111W 699 nt8.06□□□□□ -1.12
HDA1P53973 YDR327WYDR327W 327 nt8.05□□□□□ -1.12
HDA1P53973 EXG2YDR261C 1689 nt8.05□□□□□ -1.12
HDA1P53973 KDX1YKL161C 1302 nt8.04□□□□□ -1.12
HDA1P53973 BUR6YER159C 429 nt8.04□□□□□ -1.12
HDA1P53973 ATG17YLR423C 1254 nt8.04□□□□□ -1.12
HDA1P53973 ERG10YPL028W 1197 nt8.04□□□□□ -1.12
HDA1P53973 BRN1YBL097W 2265 nt8.04□□□□□ -1.12
HDA1P53973 MPE1YKL059C 1326 nt8.03□□□□□ -1.12
HDA1P53973 PLB3YOL011W 2061 nt8.03□□□□□ -1.12
HDA1P53973 GNP1YDR508C 1992 nt8.03□□□□□ -1.12
HDA1P53973 YCR049CYCR049C 447 nt8.03□□□□□ -1.12
HDA1P53973 YOL046CYOL046C 675 nt8.03□□□□□ -1.12
HDA1P53973 FLC2YAL053W 2352 nt8.03□□□□□ -1.12
HDA1P53973 MSS51YLR203C 1311 nt8.03□□□□□ -1.12
HDA1P53973 MAL31YBR298C 1845 nt8.02□□□□□ -1.13
HDA1P53973 SPG1YGR236C 288 nt8.02□□□□□ -1.13
HDA1P53973 HMT1YBR034C 1047 nt8.02□□□□□ -1.13
HDA1P53973 YIL177CYIL177C 5277 nt8.02□□□□□ -1.13
HDA1P53973 CDC23YHR166C 1881 nt8.02□□□□□ -1.13
HDA1P53973 TUB1YML085C 1344 nt8.02□□□□□ -1.13
HDA1P53973 SRY1YKL218C 981 nt8.01□□□□□ -1.13
HDA1P53973 CTA1YDR256C 1548 nt8.01□□□□□ -1.13
HDA1P53973 YLR173WYLR173W 1827 nt8.01□□□□□ -1.13
HDA1P53973 ERR3YMR323W 1314 nt8.01□□□□□ -1.13
HDA1P53973 AAD14YNL331C 1131 nt8□□□□□ -1.13
HDA1P53973 YLL058WYLL058W 1728 nt8□□□□□ -1.13
HDA1P53973 RMA1YKL132C 1293 nt7.99□□□□□ -1.13
HDA1P53973 RMD8YFR048W 1989 nt7.99□□□□□ -1.13
HDA1P53973 YJL163CYJL163C 1668 nt7.98□□□□□ -1.13
HDA1P53973 YKR018CYKR018C 2178 nt7.98□□□□□ -1.13
HDA1P53973 YNR005CYNR005C 405 nt7.98□□□□□ -1.13
HDA1P53973 HTZ1YOL012C 405 nt7.98□□□□□ -1.13
HDA1P53973 APE4YHR113W 1473 nt7.97□□□□□ -1.13
HDA1P53973 RTG2YGL252C 1767 nt7.96□□□□□ -1.14
HDA1P53973 PRC1YMR297W 1599 nt7.96□□□□□ -1.14
HDA1P53973 HPT1YDR399W 666 nt7.95□□□□□ -1.14
HDA1P53973 YAL045CYAL045C 309 nt7.95□□□□□ -1.14
HDA1P53973 NTG2YOL043C 1143 nt7.95□□□□□ -1.14
HDA1P53973 PHO85YPL031C 918 nt7.95□□□□□ -1.14
HDA1P53973 FCY2YER056C 1602 nt7.95□□□□□ -1.14
HDA1P53973 NUP57YGR119C 1626 nt7.95□□□□□ -1.14
HDA1P53973 GTS1YGL181W 1191 nt7.94□□□□□ -1.14
HDA1P53973 YIP4YGL198W 708 nt7.94□□□□□ -1.14
HDA1P53973 POR2YIL114C 846 nt7.94□□□□□ -1.14
HDA1P53973 FIT2YOR382W 462 nt7.93□□□□□ -1.14
HDA1P53973 RPL43AYPR043W 279 nt7.93□□□□□ -1.14
HDA1P53973 YRF1-1YDR545W 5391 nt7.93□□□□□ -1.14
HDA1P53973 YRF1-5YLR467W 5391 nt7.93□□□□□ -1.14
HDA1P53973 YRF1-8YOR396W 5391 nt7.93□□□□□ -1.14
HDA1P53973 SEC24YIL109C 2781 nt7.93□□□□□ -1.14
HDA1P53973 AGX1YFL030W 1158 nt7.92□□□□□ -1.14
HDA1P53973 YNL165WYNL165W 1221 nt7.92□□□□□ -1.14
HDA1P53973 ATG22YCL038C 1587 nt7.92□□□□□ -1.14
HDA1P53973 YOL099CYOL099C 492 nt7.91□□□□□ -1.14
HDA1P53973 CYS4YGR155W 1524 nt7.91□□□□□ -1.14
HDA1P53973 ENB1YOL158C 1821 nt7.91□□□□□ -1.14
HDA1P53973 SSC1YJR045C 1965 nt7.91□□□□□ -1.14
HDA1P53973 NUP84YDL116W 2181 nt7.9□□□□□ -1.14
HDA1P53973 THR1YHR025W 1074 nt7.9□□□□□ -1.14
HDA1P53973 SRN2YLR119W 642 nt7.9□□□□□ -1.14
HDA1P53973 AIM34YMR003W 597 nt7.9□□□□□ -1.14
HDA1P53973 BEM1YBR200W 1656 nt7.89□□□□□ -1.15
HDA1P53973 YIR018C-AYIR018C-A 138 nt7.88□□□□□ -1.15
HDA1P53973 SUN4YNL066W 1263 nt7.88□□□□□ -1.15
HDA1P53973 YPR076WYPR076W 375 nt7.88□□□□□ -1.15
HDA1P53973 PMP3YDR276C 168 nt7.87□□□□□ -1.15
HDA1P53973 REC107YJR021C 945 nt7.87□□□□□ -1.15
HDA1P53973 SWP1YMR149W 861 nt7.87□□□□□ -1.15
HDA1P53973 IDP3YNL009W 1263 nt7.87□□□□□ -1.15
HDA1P53973 FCY22YER060W-A 1593 nt7.87□□□□□ -1.15
HDA1P53973 CRH1YGR189C 1524 nt7.87□□□□□ -1.15
HDA1P53973 ITR1YDR497C 1755 nt7.87□□□□□ -1.15
HDA1P53973 MSC3YLR219W 2187 nt7.86□□□□□ -1.15
HDA1P53973 RPL2BYIL018W 765 nt7.86□□□□□ -1.15
HDA1P53973 HOC1YJR075W 1191 nt7.86□□□□□ -1.15
HDA1P53973 SPE4YLR146C 903 nt7.86□□□□□ -1.15
HDA1P53973 ICP55YER078C 1536 nt7.86□□□□□ -1.15
HDA1P53973 FMP40YPL222W 2067 nt7.86□□□□□ -1.15
HDA1P53973 SNU66YOR308C 1764 nt7.86□□□□□ -1.15
HDA1P53973 NUP49YGL172W 1419 nt7.86□□□□□ -1.15
HDA1P53973 ADE2YOR128C 1716 nt7.85□□□□□ -1.15
HDA1P53973 COX15YER141W 1461 nt7.85□□□□□ -1.15
HDA1P53973 IRC5YFR038W 2562 nt7.85□□□□□ -1.15
HDA1P53973 CAN1YEL063C 1773 nt7.84□□□□□ -1.15
HDA1P53973 PRB1YEL060C 1908 nt7.84□□□□□ -1.15
HDA1P53973 PPH21YDL134C 1110 nt7.84□□□□□ -1.15
HDA1P53973 LSC1YOR142W 990 nt7.84□□□□□ -1.15
HDA1P53973 CHA1YCL064C 1083 nt7.83□□□□□ -1.16
HDA1P53973 YJL211CYJL211C 444 nt7.83□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 47.5 ms