Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATF1P18846 MIR3665-201ENST00000578708 105 ntBASIC21.81■■□□□ 1.08
ATF1P18846 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATF1P18846 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATF1P18846 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATF1P18846 WHAMMP2-203ENST00000563942 1603 ntBASIC21.8■■□□□ 1.08
ATF1P18846 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATF1P18846 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATF1P18846 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATF1P18846 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATF1P18846 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATF1P18846 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATF1P18846 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATF1P18846 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.79■■□□□ 1.08
ATF1P18846 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATF1P18846 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATF1P18846 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATF1P18846 LINC00273-201ENST00000539813 1452 ntBASIC21.78■■□□□ 1.08
ATF1P18846 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATF1P18846 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATF1P18846 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATF1P18846 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATF1P18846 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.78■■□□□ 1.08
ATF1P18846 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.77■■□□□ 1.08
ATF1P18846 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ATF1P18846 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.76■■□□□ 1.07
ATF1P18846 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATF1P18846 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATF1P18846 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATF1P18846 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATF1P18846 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.76■■□□□ 1.07
ATF1P18846 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATF1P18846 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.76■■□□□ 1.07
ATF1P18846 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATF1P18846 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.76■■□□□ 1.07
ATF1P18846 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.75■■□□□ 1.07
ATF1P18846 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATF1P18846 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.75■■□□□ 1.07
ATF1P18846 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATF1P18846 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATF1P18846 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATF1P18846 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ATF1P18846 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATF1P18846 AP006261.1-201ENST00000584783 668 ntBASIC21.74■■□□□ 1.07
ATF1P18846 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
ATF1P18846 DUSP8P4-201ENST00000399538 1761 ntBASIC21.74■■□□□ 1.07
ATF1P18846 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.74■■□□□ 1.07
ATF1P18846 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATF1P18846 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATF1P18846 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATF1P18846 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.73■■□□□ 1.07
ATF1P18846 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATF1P18846 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.73■■□□□ 1.07
ATF1P18846 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
ATF1P18846 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.72■■□□□ 1.07
ATF1P18846 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATF1P18846 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ATF1P18846 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATF1P18846 AC093323.1-202ENST00000635031 2045 ntBASIC21.72■■□□□ 1.07
ATF1P18846 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.71■■□□□ 1.07
ATF1P18846 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.71■■□□□ 1.07
ATF1P18846 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATF1P18846 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.71■■□□□ 1.07
ATF1P18846 AC092803.2-201ENST00000564287 1899 ntBASIC21.71■■□□□ 1.07
ATF1P18846 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ATF1P18846 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ATF1P18846 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATF1P18846 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATF1P18846 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
ATF1P18846 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATF1P18846 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ATF1P18846 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
ATF1P18846 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.68■■□□□ 1.06
ATF1P18846 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATF1P18846 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ATF1P18846 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATF1P18846 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATF1P18846 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.67■■□□□ 1.06
ATF1P18846 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATF1P18846 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATF1P18846 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.67■■□□□ 1.06
ATF1P18846 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.67■■□□□ 1.06
ATF1P18846 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATF1P18846 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATF1P18846 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
ATF1P18846 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF1P18846 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF1P18846 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.66■■□□□ 1.06
ATF1P18846 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ATF1P18846 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ATF1P18846 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATF1P18846 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATF1P18846 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATF1P18846 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.65■■□□□ 1.06
ATF1P18846 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.65■■□□□ 1.06
ATF1P18846 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATF1P18846 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.64■■□□□ 1.05
ATF1P18846 AC087741.3-201ENST00000624270 1347 ntBASIC21.64■■□□□ 1.05
ATF1P18846 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.64■■□□□ 1.05
ATF1P18846 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms