Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.44■■□□□ 1.02
SFTPBP07988 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SFTPBP07988 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SFTPBP07988 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SFTPBP07988 AC018358.1-201ENST00000631079 1402 ntBASIC21.43■■□□□ 1.02
SFTPBP07988 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SFTPBP07988 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SFTPBP07988 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SFTPBP07988 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SFTPBP07988 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SFTPBP07988 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SFTPBP07988 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SFTPBP07988 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.42■■□□□ 1.02
SFTPBP07988 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SFTPBP07988 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SFTPBP07988 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SFTPBP07988 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.42■■□□□ 1.02
SFTPBP07988 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SFTPBP07988 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SFTPBP07988 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SFTPBP07988 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.41■■□□□ 1.02
SFTPBP07988 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SFTPBP07988 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.41■■□□□ 1.02
SFTPBP07988 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SFTPBP07988 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SFTPBP07988 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.4■■□□□ 1.02
SFTPBP07988 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SFTPBP07988 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.4■■□□□ 1.02
SFTPBP07988 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SFTPBP07988 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SFTPBP07988 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.39■■□□□ 1.02
SFTPBP07988 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SFTPBP07988 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SFTPBP07988 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.39■■□□□ 1.01
SFTPBP07988 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.39■■□□□ 1.01
SFTPBP07988 HLA-V-202ENST00000446817 847 ntBASIC21.38■■□□□ 1.01
SFTPBP07988 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SFTPBP07988 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SFTPBP07988 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SFTPBP07988 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.37■■□□□ 1.01
SFTPBP07988 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
SFTPBP07988 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SFTPBP07988 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SFTPBP07988 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.36■■□□□ 1.01
SFTPBP07988 LINC01971-201ENST00000617888 1048 ntBASIC21.36■■□□□ 1.01
SFTPBP07988 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SFTPBP07988 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SFTPBP07988 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SFTPBP07988 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SFTPBP07988 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.35■■□□□ 1.01
SFTPBP07988 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.35■■□□□ 1.01
SFTPBP07988 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SFTPBP07988 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.34■■□□□ 1.01
SFTPBP07988 DUX4L11-201ENST00000611504 1267 ntBASIC21.34■■□□□ 1.01
SFTPBP07988 DUX4L12-201ENST00000614593 1267 ntBASIC21.34■■□□□ 1.01
SFTPBP07988 DUX4L14-201ENST00000621227 1267 ntBASIC21.34■■□□□ 1.01
SFTPBP07988 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SFTPBP07988 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SFTPBP07988 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SFTPBP07988 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SFTPBP07988 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SFTPBP07988 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SFTPBP07988 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SFTPBP07988 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.33■■□□□ 1.01
SFTPBP07988 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.33■■□□□ 1.01
SFTPBP07988 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SFTPBP07988 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
SFTPBP07988 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SFTPBP07988 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SFTPBP07988 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.32■■□□□ 1
SFTPBP07988 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SFTPBP07988 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.31■■□□□ 1
SFTPBP07988 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.31■■□□□ 1
SFTPBP07988 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SFTPBP07988 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SFTPBP07988 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SFTPBP07988 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.3■■□□□ 1
SFTPBP07988 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.3■■□□□ 1
SFTPBP07988 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SFTPBP07988 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.29■■□□□ 1
SFTPBP07988 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.29■■□□□ 1
SFTPBP07988 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.29■■□□□ 1
SFTPBP07988 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.28■■□□□ 1
SFTPBP07988 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.28■■□□□ 1
SFTPBP07988 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.28■■□□□ 1
SFTPBP07988 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.28■■□□□ 1
SFTPBP07988 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SFTPBP07988 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SFTPBP07988 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SFTPBP07988 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.27■■□□□ 1
SFTPBP07988 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.27■■□□□ 1
SFTPBP07988 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SFTPBP07988 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SFTPBP07988 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.27■■□□□ 1
SFTPBP07988 AC110285.7-201ENST00000624417 1536 ntBASIC21.27■■□□□ 1
SFTPBP07988 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.27■■□□□ 1
SFTPBP07988 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SFTPBP07988 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SFTPBP07988 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SFTPBP07988 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms