Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.81■□□□□ 0.44
KRT78Q8N1N4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 AC112497.1-201ENST00000624824 639 ntBASIC17.81■□□□□ 0.44
KRT78Q8N1N4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 KRT8P50-201ENST00000562022 1438 ntBASIC17.81■□□□□ 0.44
KRT78Q8N1N4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 AC009065.1-201ENST00000564055 1225 ntBASIC17.8■□□□□ 0.44
KRT78Q8N1N4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.8■□□□□ 0.44
KRT78Q8N1N4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 AC009113.1-201ENST00000570267 2443 ntBASIC17.8■□□□□ 0.44
KRT78Q8N1N4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KRT78Q8N1N4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 AC104581.1-202ENST00000635932 2618 ntBASIC17.79■□□□□ 0.44
KRT78Q8N1N4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT78Q8N1N4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 368.5 ms