Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 LINC01568-207ENST00000641790 1380 ntBASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 AL023284.2-201ENST00000405850 579 ntBASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 AIRN-201ENST00000601203 4374 ntBASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 DUT-205ENST00000558813 769 ntTSL 2 BASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 AC073912.3-201ENST00000624414 853 ntBASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 AC099398.1-201ENST00000567919 2776 ntBASIC29.28■■■□□ 2.28
PPARGC1BQ86YN6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 KRT8P32-201ENST00000512863 1461 ntBASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 AC092338.2-201ENST00000568827 1415 ntBASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPARGC1BQ86YN6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC29.26■■■□□ 2.28
PPARGC1BQ86YN6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 AC068587.9-201ENST00000641814 219 ntBASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC29.26■■■□□ 2.27
PPARGC1BQ86YN6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 HEIH-201ENST00000623091 1652 ntBASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 AL357033.4-201ENST00000617703 1807 ntBASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 FAM87A-204ENST00000613235 858 ntBASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 AL031598.1-201ENST00000561511 1773 ntBASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 WIZP1-201ENST00000531444 2299 ntBASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 KRT8P45-201ENST00000414328 1447 ntBASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPARGC1BQ86YN6 AC126763.1-201ENST00000552015 2118 ntBASIC29.24■■■□□ 2.27
PPARGC1BQ86YN6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
PPARGC1BQ86YN6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PPARGC1BQ86YN6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC29.24■■■□□ 2.27
PPARGC1BQ86YN6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC29.24■■■□□ 2.27
PPARGC1BQ86YN6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC29.24■■■□□ 2.27
PPARGC1BQ86YN6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PPARGC1BQ86YN6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC29.24■■■□□ 2.27
PPARGC1BQ86YN6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms