Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXJ3Q9UPW0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
FOXJ3Q9UPW0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXJ3Q9UPW0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXJ3Q9UPW0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXJ3Q9UPW0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.3■□□□□ 0.2
FOXJ3Q9UPW0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXJ3Q9UPW0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXJ3Q9UPW0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 MTMR9LP-203ENST00000426597 1545 ntBASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 AC093827.2-201ENST00000512654 315 ntBASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 AC139713.2-201ENST00000641328 2723 ntBASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 KRT8P41-201ENST00000533985 1514 ntBASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
FOXJ3Q9UPW0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 AC004264.1-201ENST00000608354 794 ntBASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FOXJ3Q9UPW0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXJ3Q9UPW0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 639.8 ms