Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.58□□□□□ -0.23
TRGV1A0A0A0MS02 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
TRGV1A0A0A0MS02 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRGV1A0A0A0MS02 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRGV1A0A0A0MS02 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRGV1A0A0A0MS02 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.58□□□□□ -0.23
TRGV1A0A0A0MS02 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.58□□□□□ -0.23
TRGV1A0A0A0MS02 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 AC083906.6-201ENST00000641366 219 ntBASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 FSCN1P1-201ENST00000568912 1481 ntBASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRGV1A0A0A0MS02 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 RPS2P55-201ENST00000397318 883 ntBASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 B3GAT3P1-201ENST00000471720 806 ntBASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 AC107956.1-201ENST00000494359 873 ntBASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRGV1A0A0A0MS02 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 Z98044.1-201ENST00000632503 1764 ntBASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRGV1A0A0A0MS02 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms