RNA–Protein interactions for RNA: ENST00000239144.4

HOXB8-201, Transcript of homeobox B8, humanhuman

APPRIS P2 TSL 2 BASIC

Gene HOXB8, Length 1,823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB8-201ENST00000239144 NISCHQ9Y2I1 1504 aa44.92■■■■■ 4.78
HOXB8-201ENST00000239144 CCDC180Q9P1Z9 1646 aa39.6■■■■□ 3.93
HOXB8-201ENST00000239144 ABCC9O60706 1549 aa38.12■■■■□ 3.69
HOXB8-201ENST00000239144 ZCCHC6Q5VYS8 1495 aaKnown RBP37.57■■■■□ 3.61
HOXB8-201ENST00000239144 DCAF8L2P0C7V8 631 aa37.29■■■■□ 3.56
HOXB8-201ENST00000239144 DCAF1Q9Y4B6 1507 aa37.17■■■■□ 3.54
HOXB8-201ENST00000239144 NACADO15069 1562 aa37.07■■■■□ 3.52
HOXB8-201ENST00000239144 MYO15BQ96JP2 1530 aa37.06■■■■□ 3.52
HOXB8-201ENST00000239144 RB1CC1Q8TDY2 1594 aa36.95■■■■□ 3.51
HOXB8-201ENST00000239144 SCRIBQ14160 1630 aa36.25■■■■□ 3.39
HOXB8-201ENST00000239144 UNC13AQ9UPW8 1703 aa36.16■■■■□ 3.38
HOXB8-201ENST00000239144 SHROOM4Q9ULL8 1493 aa35.98■■■■□ 3.35
HOXB8-201ENST00000239144 BICRAQ9NZM4 1560 aa35.82■■■■□ 3.32
HOXB8-201ENST00000239144 PABPN1Q86U42 306 aaKnown RBP eCLIP35.76■■■■□ 3.31
HOXB8-201ENST00000239144 CECR2Q9BXF3 1484 aa34.94■■■■□ 3.18
HOXB8-201ENST00000239144 EIF4G1Q04637 1599 aaKnown RBP34.82■■■■□ 3.16
HOXB8-201ENST00000239144 BAZ1AQ9NRL2 1556 aaPredicted RBP34.77■■■■□ 3.16
HOXB8-201ENST00000239144 SMARCA4P51532 1647 aa34.71■■■■□ 3.15
HOXB8-201ENST00000239144 MROH2BQ7Z745 1585 aa34.65■■■■□ 3.14
HOXB8-201ENST00000239144 CC2D2AQ9P2K1 1620 aa34.51■■■■□ 3.12
HOXB8-201ENST00000239144 RSF1Q96T23 1441 aaPredicted RBP34.5■■■■□ 3.11
HOXB8-201ENST00000239144 DNAJC5BQ9UF47 199 aa34.34■■■■□ 3.09
HOXB8-201ENST00000239144 ATAD2BQ9ULI0 1458 aa34.34■■■■□ 3.09
HOXB8-201ENST00000239144 PEG3Q9GZU2 1588 aa34.34■■■■□ 3.09
HOXB8-201ENST00000239144 SMARCA2P51531 1590 aa34.32■■■■□ 3.09
HOXB8-201ENST00000239144 WIZO95785 1651 aa34.32■■■■□ 3.08
HOXB8-201ENST00000239144 SUPT5HO00267 1087 aaKnown RBP34.2■■■■□ 3.07
HOXB8-201ENST00000239144 NCAPD3P42695 1498 aa34.19■■■■□ 3.06
HOXB8-201ENST00000239144 BAZ1BQ9UIG0 1483 aaKnown RBP34.1■■■■□ 3.05
HOXB8-201ENST00000239144 HMGXB3Q12766 1538 aa34.1■■■■□ 3.05
HOXB8-201ENST00000239144 TOP2AP11388 1531 aaKnown RBP33.98■■■■□ 3.03
HOXB8-201ENST00000239144 CCDC88BA6NC98 1476 aa33.58■■■□□ 2.97
HOXB8-201ENST00000239144 CADPSQ9ULU8 1353 aa33.25■■■□□ 2.91
HOXB8-201ENST00000239144 CFTRP13569 1480 aa33.2■■■□□ 2.91
HOXB8-201ENST00000239144 NESP48681 1621 aa33.2■■■□□ 2.91
HOXB8-201ENST00000239144 LAMC3Q9Y6N6 1575 aa33.19■■■□□ 2.9
HOXB8-201ENST00000239144 PRDM2Q13029 1718 aa33.02■■■□□ 2.88
HOXB8-201ENST00000239144 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
HOXB8-201ENST00000239144 FANCD2Q9BXW9 1451 aa32.88■■■□□ 2.85
HOXB8-201ENST00000239144 KIF21AQ7Z4S6 1674 aa32.83■■■□□ 2.85
HOXB8-201ENST00000239144 ERCC6Q03468 1493 aa32.8■■■□□ 2.84
HOXB8-201ENST00000239144 CEP164Q9UPV0 1460 aa32.77■■■□□ 2.84
HOXB8-201ENST00000239144 ABCC8Q09428 1581 aa32.6■■■□□ 2.81
HOXB8-201ENST00000239144 MRC2Q9UBG0 1479 aa32.57■■■□□ 2.8
HOXB8-201ENST00000239144 THOC2Q8NI27 1593 aaKnown RBP32.53■■■□□ 2.8
HOXB8-201ENST00000239144 URB2Q14146 1524 aaKnown RBP32.51■■■□□ 2.8
HOXB8-201ENST00000239144 WRNQ14191 1432 aaPredicted RBP eCLIP32.51■■■□□ 2.8
HOXB8-201ENST00000239144 CUX1P39880 1505 aa32.46■■■□□ 2.79
HOXB8-201ENST00000239144 DNMBPQ6XZF7 1577 aa32.45■■■□□ 2.79
HOXB8-201ENST00000239144 WDR62O43379 1518 aa32.44■■■□□ 2.78
HOXB8-201ENST00000239144 TOPBP1Q92547 1522 aa32.44■■■□□ 2.78
HOXB8-201ENST00000239144 SYNJ1O43426 1573 aa32.41■■■□□ 2.78
HOXB8-201ENST00000239144 TOP2BQ02880 1626 aa32.36■■■□□ 2.77
HOXB8-201ENST00000239144 BIVM-ERCC5R4GMW8 1640 aa32.35■■■□□ 2.77
HOXB8-201ENST00000239144 CHIC1Q5VXU3 224 aa32.3■■■□□ 2.76
HOXB8-201ENST00000239144 FGD5Q6ZNL6 1462 aa32.24■■■□□ 2.75
HOXB8-201ENST00000239144 TRIM41Q8WV44 630 aa32.24■■■□□ 2.75
HOXB8-201ENST00000239144 POLA1P09884 1462 aaPredicted RBP32.22■■■□□ 2.75
HOXB8-201ENST00000239144 CUX2O14529 1486 aa32.16■■■□□ 2.74
HOXB8-201ENST00000239144 SOGA1O94964 1423 aa32.09■■■□□ 2.73
HOXB8-201ENST00000239144 RAD54L2Q9Y4B4 1467 aa32.07■■■□□ 2.72
HOXB8-201ENST00000239144 IFT140Q96RY7 1462 aa32.04■■■□□ 2.72
HOXB8-201ENST00000239144 TARBP1Q13395 1621 aaKnown RBP32.03■■■□□ 2.72
HOXB8-201ENST00000239144 ABCA10Q8WWZ4 1543 aa31.95■■■□□ 2.71
HOXB8-201ENST00000239144 WDR97A6NE52 1622 aa31.94■■■□□ 2.7
HOXB8-201ENST00000239144 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
HOXB8-201ENST00000239144 TDRD9Q8NDG6 1382 aaKnown RBP31.83■■■□□ 2.69
HOXB8-201ENST00000239144 AQRO60306 1485 aaKnown RBP eCLIP31.78■■■□□ 2.68
HOXB8-201ENST00000239144 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
HOXB8-201ENST00000239144 ABCA5Q8WWZ7 1642 aa31.77■■■□□ 2.68
HOXB8-201ENST00000239144 KIF27Q86VH2 1401 aa31.77■■■□□ 2.68
HOXB8-201ENST00000239144 GAPVD1Q14C86 1478 aa31.73■■■□□ 2.67
HOXB8-201ENST00000239144 RUSC2Q8N2Y8 1516 aa31.73■■■□□ 2.67
HOXB8-201ENST00000239144 PBRM1Q86U86 1689 aa31.63■■■□□ 2.65
HOXB8-201ENST00000239144 GRIN2BQ13224 1484 aa31.62■■■□□ 2.65
HOXB8-201ENST00000239144 EEA1Q15075 1411 aa31.62■■■□□ 2.65
HOXB8-201ENST00000239144 FAM9AQ8IZU1 332 aaPredicted RBP31.59■■■□□ 2.65
HOXB8-201ENST00000239144 ERICH3Q5RHP9 1530 aa31.58■■■□□ 2.65
HOXB8-201ENST00000239144 IGF1RP08069 1367 aa31.56■■■□□ 2.64
HOXB8-201ENST00000239144 SNAPC4Q5SXM2 1469 aa31.5■■■□□ 2.63
HOXB8-201ENST00000239144 CSRNP3Q8WYN3 585 aa31.49■■■□□ 2.63
HOXB8-201ENST00000239144 MAGI1Q96QZ7 1491 aaPredicted RBP31.46■■■□□ 2.63
HOXB8-201ENST00000239144 CUL7Q14999 1698 aa31.43■■■□□ 2.62
HOXB8-201ENST00000239144 ADAMTS12P58397 1594 aa31.42■■■□□ 2.62
HOXB8-201ENST00000239144 CARMIL1Q5VZK9 1371 aa31.39■■■□□ 2.62
HOXB8-201ENST00000239144 FHAD1B1AJZ9 1412 aa31.38■■■□□ 2.61
HOXB8-201ENST00000239144 PRXQ9BXM0 1461 aa31.34■■■□□ 2.61
HOXB8-201ENST00000239144 SYNJ2O15056 1496 aa31.33■■■□□ 2.61
HOXB8-201ENST00000239144 RAPGEF2Q9Y4G8 1499 aa31.28■■■□□ 2.6
HOXB8-201ENST00000239144 FBLN2P98095 1184 aa31.27■■■□□ 2.6
HOXB8-201ENST00000239144 CHMP7Q8WUX9 453 aaPredicted RBP31.27■■■□□ 2.6
HOXB8-201ENST00000239144 KIF21BO75037 1637 aa31.26■■■□□ 2.59
HOXB8-201ENST00000239144 CHD1O14646 1710 aa31.24■■■□□ 2.59
HOXB8-201ENST00000239144 GRIN2AQ12879 1464 aa31.23■■■□□ 2.59
HOXB8-201ENST00000239144 EHMT2Q96KQ7 1210 aa31.16■■■□□ 2.58
HOXB8-201ENST00000239144 GOLGA3Q08378 1498 aa31.13■■■□□ 2.57
HOXB8-201ENST00000239144 CEP170Q5SW79 1584 aa31.05■■■□□ 2.56
HOXB8-201ENST00000239144 NUP160Q12769 1436 aa31.04■■■□□ 2.56
HOXB8-201ENST00000239144 LOC105371045A0A1W2PR82 267 aa31.01■■■□□ 2.56
HOXB8-201ENST00000239144 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms