Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.27■□□□□ 0.2
SFTPBP07988 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.27■□□□□ 0.2
SFTPBP07988 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SFTPBP07988 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.27■□□□□ 0.2
SFTPBP07988 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.27■□□□□ 0.2
SFTPBP07988 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.27■□□□□ 0.2
SFTPBP07988 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.27■□□□□ 0.2
SFTPBP07988 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.27■□□□□ 0.19
SFTPBP07988 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SFTPBP07988 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SFTPBP07988 NBPF21P-201ENST00000425093 1451 ntBASIC16.27■□□□□ 0.19
SFTPBP07988 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.27■□□□□ 0.19
SFTPBP07988 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.27■□□□□ 0.19
SFTPBP07988 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.27■□□□□ 0.19
SFTPBP07988 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SFTPBP07988 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.27■□□□□ 0.19
SFTPBP07988 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SFTPBP07988 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SFTPBP07988 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SFTPBP07988 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SFTPBP07988 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.27■□□□□ 0.19
SFTPBP07988 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
SFTPBP07988 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SFTPBP07988 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.26■□□□□ 0.19
SFTPBP07988 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SFTPBP07988 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.26■□□□□ 0.19
SFTPBP07988 MIR718-201ENST00000390190 70 ntBASIC16.26■□□□□ 0.19
SFTPBP07988 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.26■□□□□ 0.19
SFTPBP07988 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.26■□□□□ 0.19
SFTPBP07988 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.26■□□□□ 0.19
SFTPBP07988 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.26■□□□□ 0.19
SFTPBP07988 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.26■□□□□ 0.19
SFTPBP07988 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.26■□□□□ 0.19
SFTPBP07988 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SFTPBP07988 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 LTB4R2-202ENST00000528054 3092 ntBASIC16.26■□□□□ 0.19
SFTPBP07988 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.26■□□□□ 0.19
SFTPBP07988 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.26■□□□□ 0.19
SFTPBP07988 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.26■□□□□ 0.19
SFTPBP07988 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SFTPBP07988 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.25■□□□□ 0.19
SFTPBP07988 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SFTPBP07988 FEM1AP3-201ENST00000403722 1741 ntBASIC16.25■□□□□ 0.19
SFTPBP07988 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SFTPBP07988 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.25■□□□□ 0.19
SFTPBP07988 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SFTPBP07988 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.25■□□□□ 0.19
SFTPBP07988 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SFTPBP07988 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SFTPBP07988 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.25■□□□□ 0.19
SFTPBP07988 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.25■□□□□ 0.19
SFTPBP07988 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.25■□□□□ 0.19
SFTPBP07988 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.25■□□□□ 0.19
SFTPBP07988 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SFTPBP07988 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms