Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD8Q9HCK8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.22■■□□□ 1.47
CHD8Q9HCK8 AC092666.2-201ENST00000613287 246 ntBASIC24.21■■□□□ 1.47
CHD8Q9HCK8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.21■■□□□ 1.47
CHD8Q9HCK8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHD8Q9HCK8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD8Q9HCK8 MIR4508-201ENST00000584178 70 ntBASIC24.21■■□□□ 1.47
CHD8Q9HCK8 RAP2CP1-202ENST00000605179 643 ntBASIC24.21■■□□□ 1.47
CHD8Q9HCK8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD8Q9HCK8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD8Q9HCK8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.2■■□□□ 1.46
CHD8Q9HCK8 AC026202.3-201ENST00000600805 1127 ntBASIC24.19■■□□□ 1.46
CHD8Q9HCK8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD8Q9HCK8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
CHD8Q9HCK8 AC139795.1-202ENST00000500444 432 ntBASIC24.18■■□□□ 1.46
CHD8Q9HCK8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD8Q9HCK8 AC239859.2-201ENST00000444165 318 ntBASIC24.18■■□□□ 1.46
CHD8Q9HCK8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD8Q9HCK8 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD8Q9HCK8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHD8Q9HCK8 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD8Q9HCK8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.17■■□□□ 1.46
CHD8Q9HCK8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHD8Q9HCK8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.16■■□□□ 1.46
CHD8Q9HCK8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.16■■□□□ 1.46
CHD8Q9HCK8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.16■■□□□ 1.46
CHD8Q9HCK8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CHD8Q9HCK8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHD8Q9HCK8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD8Q9HCK8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CHD8Q9HCK8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.14■■□□□ 1.46
CHD8Q9HCK8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CHD8Q9HCK8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CHD8Q9HCK8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CHD8Q9HCK8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.14■■□□□ 1.45
CHD8Q9HCK8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
CHD8Q9HCK8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.13■■□□□ 1.45
CHD8Q9HCK8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD8Q9HCK8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CHD8Q9HCK8 PVT1_1.1-201ENST00000615125 194 ntBASIC24.13■■□□□ 1.45
CHD8Q9HCK8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD8Q9HCK8 WHAMMP2-203ENST00000563942 1603 ntBASIC24.13■■□□□ 1.45
CHD8Q9HCK8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.12■■□□□ 1.45
CHD8Q9HCK8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.12■■□□□ 1.45
CHD8Q9HCK8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
CHD8Q9HCK8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.11■■□□□ 1.45
CHD8Q9HCK8 AC110285.7-201ENST00000624417 1536 ntBASIC24.11■■□□□ 1.45
CHD8Q9HCK8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
CHD8Q9HCK8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CHD8Q9HCK8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHD8Q9HCK8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.11■■□□□ 1.45
CHD8Q9HCK8 Z92544.1-202ENST00000571933 1220 ntBASIC24.1■■□□□ 1.45
CHD8Q9HCK8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CHD8Q9HCK8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD8Q9HCK8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHD8Q9HCK8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.09■■□□□ 1.45
CHD8Q9HCK8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CHD8Q9HCK8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CHD8Q9HCK8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.08■■□□□ 1.45
CHD8Q9HCK8 AL031848.2-201ENST00000607670 837 ntBASIC24.08■■□□□ 1.45
CHD8Q9HCK8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD8Q9HCK8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD8Q9HCK8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
CHD8Q9HCK8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD8Q9HCK8 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.06■■□□□ 1.44
CHD8Q9HCK8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CHD8Q9HCK8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD8Q9HCK8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD8Q9HCK8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD8Q9HCK8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD8Q9HCK8 AC135983.2-203ENST00000454486 1613 ntBASIC24.05■■□□□ 1.44
CHD8Q9HCK8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD8Q9HCK8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD8Q9HCK8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHD8Q9HCK8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.04■■□□□ 1.44
CHD8Q9HCK8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD8Q9HCK8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD8Q9HCK8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD8Q9HCK8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD8Q9HCK8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.03■■□□□ 1.44
CHD8Q9HCK8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CHD8Q9HCK8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CHD8Q9HCK8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD8Q9HCK8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CHD8Q9HCK8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.02■■□□□ 1.44
CHD8Q9HCK8 AC126177.7-201ENST00000547904 679 ntBASIC24.02■■□□□ 1.44
CHD8Q9HCK8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHD8Q9HCK8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD8Q9HCK8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD8Q9HCK8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
CHD8Q9HCK8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD8Q9HCK8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD8Q9HCK8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD8Q9HCK8 AC093536.1-201ENST00000569153 554 ntBASIC24.01■■□□□ 1.43
CHD8Q9HCK8 AL139246.5-201ENST00000606645 996 ntBASIC24.01■■□□□ 1.43
CHD8Q9HCK8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
CHD8Q9HCK8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.01■■□□□ 1.43
CHD8Q9HCK8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD8Q9HCK8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CHD8Q9HCK8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms