Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.02■□□□□ 0.63
HIST1H1AQ02539 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H1AQ02539 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.01■□□□□ 0.63
HIST1H1AQ02539 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H1AQ02539 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H1AQ02539 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HIST1H1AQ02539 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19■□□□□ 0.63
HIST1H1AQ02539 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19■□□□□ 0.63
HIST1H1AQ02539 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19■□□□□ 0.63
HIST1H1AQ02539 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1AQ02539 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19■□□□□ 0.63
HIST1H1AQ02539 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1AQ02539 AC135983.2-203ENST00000454486 1613 ntBASIC19■□□□□ 0.63
HIST1H1AQ02539 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H1AQ02539 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H1AQ02539 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H1AQ02539 LINC01003-201ENST00000564834 1764 ntBASIC18.98■□□□□ 0.63
HIST1H1AQ02539 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.98■□□□□ 0.63
HIST1H1AQ02539 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1AQ02539 WHAMMP2-203ENST00000563942 1603 ntBASIC18.97■□□□□ 0.63
HIST1H1AQ02539 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1AQ02539 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HIST1H1AQ02539 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1AQ02539 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.97■□□□□ 0.63
HIST1H1AQ02539 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1AQ02539 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST1H1AQ02539 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.96■□□□□ 0.63
HIST1H1AQ02539 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HIST1H1AQ02539 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.96■□□□□ 0.63
HIST1H1AQ02539 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST1H1AQ02539 LINC00273-201ENST00000539813 1452 ntBASIC18.96■□□□□ 0.63
HIST1H1AQ02539 AP002414.2-202ENST00000590929 1450 ntBASIC18.96■□□□□ 0.63
HIST1H1AQ02539 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 AL162393.1-201ENST00000437852 946 ntBASIC18.95■□□□□ 0.62
HIST1H1AQ02539 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 AC087741.3-201ENST00000624270 1347 ntBASIC18.95■□□□□ 0.62
HIST1H1AQ02539 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST1H1AQ02539 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST1H1AQ02539 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.94■□□□□ 0.62
HIST1H1AQ02539 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST1H1AQ02539 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.94■□□□□ 0.62
HIST1H1AQ02539 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HIST1H1AQ02539 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H1AQ02539 AC044849.2-201ENST00000606596 710 ntBASIC18.93■□□□□ 0.62
HIST1H1AQ02539 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.93■□□□□ 0.62
HIST1H1AQ02539 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.92■□□□□ 0.62
HIST1H1AQ02539 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H1AQ02539 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H1AQ02539 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.91■□□□□ 0.62
HIST1H1AQ02539 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HIST1H1AQ02539 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H1AQ02539 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HIST1H1AQ02539 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.91■□□□□ 0.62
HIST1H1AQ02539 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H1AQ02539 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.9■□□□□ 0.62
HIST1H1AQ02539 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1AQ02539 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1AQ02539 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1AQ02539 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1AQ02539 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1AQ02539 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1AQ02539 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1AQ02539 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HIST1H1AQ02539 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1AQ02539 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HIST1H1AQ02539 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST1H1AQ02539 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST1H1AQ02539 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HIST1H1AQ02539 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HIST1H1AQ02539 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1AQ02539 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1AQ02539 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1AQ02539 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.87■□□□□ 0.61
HIST1H1AQ02539 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST1H1AQ02539 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HIST1H1AQ02539 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST1H1AQ02539 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST1H1AQ02539 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.87■□□□□ 0.61
HIST1H1AQ02539 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1AQ02539 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HIST1H1AQ02539 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1AQ02539 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms