RNA–Protein interactions for RNA: ENST00000641706.1

CASC19-253, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 818 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-253ENST00000641706 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
CASC19-253ENST00000641706 AEBP2Q6ZN18 517 aaPredicted RBP15.56■□□□□ 0.08
CASC19-253ENST00000641706 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
CASC19-253ENST00000641706 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.19
CASC19-253ENST00000641706 SENP3Q9H4L4 574 aaPredicted RBP13.5□□□□□ -0.25
CASC19-253ENST00000641706 ZCCHC6Q5VYS8 1495 aaKnown RBP13.27□□□□□ -0.29
CASC19-253ENST00000641706 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.29
CASC19-253ENST00000641706 ABCC9O60706 1549 aa13.13□□□□□ -0.31
CASC19-253ENST00000641706 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
CASC19-253ENST00000641706 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
CASC19-253ENST00000641706 NACADO15069 1562 aa12.95□□□□□ -0.34
CASC19-253ENST00000641706 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
CASC19-253ENST00000641706 RB1CC1Q8TDY2 1594 aa12.86□□□□□ -0.35
CASC19-253ENST00000641706 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
CASC19-253ENST00000641706 SHROOM4Q9ULL8 1493 aa12.62□□□□□ -0.39
CASC19-253ENST00000641706 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
CASC19-253ENST00000641706 FOXD1Q16676 465 aa12.52□□□□□ -0.41
CASC19-253ENST00000641706 POTEDQ86YR6 584 aa12.52□□□□□ -0.41
CASC19-253ENST00000641706 BICRAQ9NZM4 1560 aa12.46□□□□□ -0.42
CASC19-253ENST00000641706 PABPN1Q86U42 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
CASC19-253ENST00000641706 CECR2Q9BXF3 1484 aa12.22□□□□□ -0.45
CASC19-253ENST00000641706 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
CASC19-253ENST00000641706 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
CASC19-253ENST00000641706 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
CASC19-253ENST00000641706 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
CASC19-253ENST00000641706 EIF4G1Q04637 1599 aaKnown RBP12.09□□□□□ -0.47
CASC19-253ENST00000641706 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
CASC19-253ENST00000641706 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
CASC19-253ENST00000641706 WIZO95785 1651 aa12.03□□□□□ -0.48
CASC19-253ENST00000641706 SMARCA2P51531 1590 aa12.02□□□□□ -0.49
CASC19-253ENST00000641706 ATAD2BQ9ULI0 1458 aa12□□□□□ -0.49
CASC19-253ENST00000641706 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
CASC19-253ENST00000641706 MSH5O43196 834 aa11.97□□□□□ -0.49
CASC19-253ENST00000641706 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
CASC19-253ENST00000641706 NCAPD3P42695 1498 aa11.94□□□□□ -0.5
CASC19-253ENST00000641706 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
CASC19-253ENST00000641706 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
CASC19-253ENST00000641706 CCDC88BA6NC98 1476 aa11.79□□□□□ -0.52
CASC19-253ENST00000641706 PIAS4Q8N2W9 510 aaPredicted RBP11.71□□□□□ -0.53
CASC19-253ENST00000641706 DNAJC5BQ9UF47 199 aa11.65□□□□□ -0.54
CASC19-253ENST00000641706 CFTRP13569 1480 aa11.63□□□□□ -0.55
CASC19-253ENST00000641706 CADPSQ9ULU8 1353 aa11.58□□□□□ -0.56
CASC19-253ENST00000641706 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
CASC19-253ENST00000641706 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
CASC19-253ENST00000641706 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
CASC19-253ENST00000641706 NESP48681 1621 aa11.49□□□□□ -0.57
CASC19-253ENST00000641706 ABCC8Q09428 1581 aa11.47□□□□□ -0.57
CASC19-253ENST00000641706 FANCD2Q9BXW9 1451 aa11.46□□□□□ -0.57
CASC19-253ENST00000641706 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
CASC19-253ENST00000641706 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
CASC19-253ENST00000641706 CEP164Q9UPV0 1460 aa11.42□□□□□ -0.58
CASC19-253ENST00000641706 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
CASC19-253ENST00000641706 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
CASC19-253ENST00000641706 TOP2BQ02880 1626 aa11.41□□□□□ -0.58
CASC19-253ENST00000641706 ADRA2BP18089 450 aa11.4□□□□□ -0.58
CASC19-253ENST00000641706 CUX1P39880 1505 aa11.4□□□□□ -0.59
CASC19-253ENST00000641706 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
CASC19-253ENST00000641706 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
CASC19-253ENST00000641706 KIF21AQ7Z4S6 1674 aa11.38□□□□□ -0.59
CASC19-253ENST00000641706 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
CASC19-253ENST00000641706 URB2Q14146 1524 aaKnown RBP11.33□□□□□ -0.6
CASC19-253ENST00000641706 TOPBP1Q92547 1522 aa11.33□□□□□ -0.6
CASC19-253ENST00000641706 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
CASC19-253ENST00000641706 ERCC6Q03468 1493 aa11.3□□□□□ -0.6
CASC19-253ENST00000641706 WDR62O43379 1518 aa11.3□□□□□ -0.6
CASC19-253ENST00000641706 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
CASC19-253ENST00000641706 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
CASC19-253ENST00000641706 EEA1Q15075 1411 aa11.26□□□□□ -0.61
CASC19-253ENST00000641706 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
CASC19-253ENST00000641706 SOGA1O94964 1423 aa11.22□□□□□ -0.61
CASC19-253ENST00000641706 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
CASC19-253ENST00000641706 WDR97A6NE52 1622 aa11.21□□□□□ -0.61
CASC19-253ENST00000641706 CUX2O14529 1486 aa11.19□□□□□ -0.62
CASC19-253ENST00000641706 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
CASC19-253ENST00000641706 TARBP1Q13395 1621 aaKnown RBP11.18□□□□□ -0.62
CASC19-253ENST00000641706 RUSC2Q8N2Y8 1516 aa11.17□□□□□ -0.62
CASC19-253ENST00000641706 RAD54L2Q9Y4B4 1467 aa11.17□□□□□ -0.62
CASC19-253ENST00000641706 IFT140Q96RY7 1462 aa11.16□□□□□ -0.62
CASC19-253ENST00000641706 ABCA5Q8WWZ7 1642 aa11.16□□□□□ -0.62
CASC19-253ENST00000641706 KIF21BO75037 1637 aa11.12□□□□□ -0.63
CASC19-253ENST00000641706 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
CASC19-253ENST00000641706 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
CASC19-253ENST00000641706 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
CASC19-253ENST00000641706 FAM9AQ8IZU1 332 aaPredicted RBP11.09□□□□□ -0.63
CASC19-253ENST00000641706 GAPVD1Q14C86 1478 aa11.08□□□□□ -0.64
CASC19-253ENST00000641706 IGF1RP08069 1367 aa11.07□□□□□ -0.64
CASC19-253ENST00000641706 CUL7Q14999 1698 aa11.07□□□□□ -0.64
CASC19-253ENST00000641706 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
CASC19-253ENST00000641706 GOLGA3Q08378 1498 aa11.06□□□□□ -0.64
CASC19-253ENST00000641706 ZNF608Q9ULD9 1512 aaPredicted RBP11.06□□□□□ -0.64
CASC19-253ENST00000641706 TDRD9Q8NDG6 1382 aaKnown RBP11.05□□□□□ -0.64
CASC19-253ENST00000641706 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
CASC19-253ENST00000641706 GRIN2BQ13224 1484 aa11.04□□□□□ -0.64
CASC19-253ENST00000641706 RAPGEF2Q9Y4G8 1499 aa11.03□□□□□ -0.64
CASC19-253ENST00000641706 AQRO60306 1485 aaKnown RBP eCLIP11.02□□□□□ -0.65
CASC19-253ENST00000641706 CARMIL1Q5VZK9 1371 aa11.02□□□□□ -0.65
CASC19-253ENST00000641706 ADAMTS12P58397 1594 aa11.01□□□□□ -0.65
CASC19-253ENST00000641706 LOC105371045A0A1W2PR82 267 aa11□□□□□ -0.65
CASC19-253ENST00000641706 MAGI1Q96QZ7 1491 aaPredicted RBP11□□□□□ -0.65
CASC19-253ENST00000641706 TNIKQ9UKE5 1360 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms