RNA–Protein interactions for RNA: ENST00000641688.1

GYPA-214, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 BASIC

Gene GYPA, Length 1,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-214ENST00000641688 NISCHQ9Y2I1 1504 aa15.13■□□□□ 0.01
GYPA-214ENST00000641688 AEBP2Q6ZN18 517 aaPredicted RBP14.96□□□□□ -0.02
GYPA-214ENST00000641688 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
GYPA-214ENST00000641688 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
GYPA-214ENST00000641688 ABCC9O60706 1549 aa13.55□□□□□ -0.24
GYPA-214ENST00000641688 CCDC180Q9P1Z9 1646 aa13.45□□□□□ -0.26
GYPA-214ENST00000641688 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
GYPA-214ENST00000641688 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
GYPA-214ENST00000641688 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
GYPA-214ENST00000641688 NACADO15069 1562 aa12.73□□□□□ -0.37
GYPA-214ENST00000641688 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
GYPA-214ENST00000641688 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
GYPA-214ENST00000641688 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
GYPA-214ENST00000641688 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
GYPA-214ENST00000641688 ZCCHC6Q5VYS8 1495 aaKnown RBP12.54□□□□□ -0.4
GYPA-214ENST00000641688 MYO15BQ96JP2 1530 aa12.51□□□□□ -0.41
GYPA-214ENST00000641688 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
GYPA-214ENST00000641688 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
GYPA-214ENST00000641688 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
GYPA-214ENST00000641688 FOXD1Q16676 465 aa12.31□□□□□ -0.44
GYPA-214ENST00000641688 MSH5O43196 834 aa12.23□□□□□ -0.45
GYPA-214ENST00000641688 CC2D2AQ9P2K1 1620 aa12.19□□□□□ -0.46
GYPA-214ENST00000641688 EIF4G1Q04637 1599 aaKnown RBP12.16□□□□□ -0.46
GYPA-214ENST00000641688 SHROOM4Q9ULL8 1493 aa12.16□□□□□ -0.46
GYPA-214ENST00000641688 CECR2Q9BXF3 1484 aa12.15□□□□□ -0.47
GYPA-214ENST00000641688 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
GYPA-214ENST00000641688 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
GYPA-214ENST00000641688 NCAPD3P42695 1498 aa11.77□□□□□ -0.52
GYPA-214ENST00000641688 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
GYPA-214ENST00000641688 SMARCA2P51531 1590 aa11.71□□□□□ -0.54
GYPA-214ENST00000641688 BAZ1AQ9NRL2 1556 aaPredicted RBP11.71□□□□□ -0.54
GYPA-214ENST00000641688 NESP48681 1621 aa11.67□□□□□ -0.54
GYPA-214ENST00000641688 BAZ1BQ9UIG0 1483 aaKnown RBP11.67□□□□□ -0.54
GYPA-214ENST00000641688 HMGXB3Q12766 1538 aa11.66□□□□□ -0.54
GYPA-214ENST00000641688 ERCC6Q03468 1493 aa11.64□□□□□ -0.55
GYPA-214ENST00000641688 PEG3Q9GZU2 1588 aa11.6□□□□□ -0.55
GYPA-214ENST00000641688 WIZO95785 1651 aa11.59□□□□□ -0.55
GYPA-214ENST00000641688 CUX2O14529 1486 aa11.52□□□□□ -0.57
GYPA-214ENST00000641688 DNAJC5Q9H3Z4 198 aa11.51□□□□□ -0.57
GYPA-214ENST00000641688 RSF1Q96T23 1441 aaPredicted RBP11.49□□□□□ -0.57
GYPA-214ENST00000641688 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
GYPA-214ENST00000641688 KIF21AQ7Z4S6 1674 aa11.47□□□□□ -0.57
GYPA-214ENST00000641688 CADPSQ9ULU8 1353 aa11.46□□□□□ -0.58
GYPA-214ENST00000641688 THOC2Q8NI27 1593 aaKnown RBP11.44□□□□□ -0.58
GYPA-214ENST00000641688 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
GYPA-214ENST00000641688 TOP2AP11388 1531 aaKnown RBP11.37□□□□□ -0.59
GYPA-214ENST00000641688 MRC2Q9UBG0 1479 aa11.34□□□□□ -0.59
GYPA-214ENST00000641688 SUPT5HO00267 1087 aaKnown RBP11.33□□□□□ -0.59
GYPA-214ENST00000641688 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
GYPA-214ENST00000641688 CFTRP13569 1480 aa11.32□□□□□ -0.6
GYPA-214ENST00000641688 CEP164Q9UPV0 1460 aa11.31□□□□□ -0.6
GYPA-214ENST00000641688 CCDC88BA6NC98 1476 aa11.3□□□□□ -0.6
GYPA-214ENST00000641688 WDR62O43379 1518 aa11.28□□□□□ -0.6
GYPA-214ENST00000641688 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
GYPA-214ENST00000641688 URB2Q14146 1524 aaKnown RBP11.25□□□□□ -0.61
GYPA-214ENST00000641688 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
GYPA-214ENST00000641688 PIAS4Q8N2W9 510 aaPredicted RBP11.14□□□□□ -0.63
GYPA-214ENST00000641688 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
GYPA-214ENST00000641688 TOPBP1Q92547 1522 aa11.13□□□□□ -0.63
GYPA-214ENST00000641688 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
GYPA-214ENST00000641688 HRCP23327 699 aa11.09□□□□□ -0.63
GYPA-214ENST00000641688 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
GYPA-214ENST00000641688 IFT140Q96RY7 1462 aa11.07□□□□□ -0.64
GYPA-214ENST00000641688 DNMBPQ6XZF7 1577 aa11.06□□□□□ -0.64
GYPA-214ENST00000641688 AQRO60306 1485 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■□□□□ 9.4
GYPA-214ENST00000641688 RAD54L2Q9Y4B4 1467 aa11.04□□□□□ -0.64
GYPA-214ENST00000641688 ABCC8Q09428 1581 aa11.03□□□□□ -0.64
GYPA-214ENST00000641688 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
GYPA-214ENST00000641688 FBLN2P98095 1184 aa11.01□□□□□ -0.65
GYPA-214ENST00000641688 EIF4G3O43432 1585 aaKnown RBP11.01□□□□□ -0.65
GYPA-214ENST00000641688 TARBP1Q13395 1621 aaKnown RBP11.01□□□□□ -0.65
GYPA-214ENST00000641688 TDRD9Q8NDG6 1382 aaKnown RBP11□□□□□ -0.65
GYPA-214ENST00000641688 SOGA1O94964 1423 aa10.99□□□□□ -0.65
GYPA-214ENST00000641688 CUX1P39880 1505 aa10.98□□□□□ -0.65
GYPA-214ENST00000641688 FGD5Q6ZNL6 1462 aa10.97□□□□□ -0.65
GYPA-214ENST00000641688 CHD1O14646 1710 aa10.94□□□□□ -0.66
GYPA-214ENST00000641688 RIMBP3CA6NJZ7 1639 aa10.93□□□□□ -0.66
GYPA-214ENST00000641688 RIMBP3BA6NNM3 1639 aa10.93□□□□□ -0.66
GYPA-214ENST00000641688 RIMBP3Q9UFD9 1639 aa10.93□□□□□ -0.66
GYPA-214ENST00000641688 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.67
GYPA-214ENST00000641688 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.67
GYPA-214ENST00000641688 POTEHQ6S545 545 aa10.9□□□□□ -0.67
GYPA-214ENST00000641688 ARHGEF11O15085 1522 aa10.89□□□□□ -0.67
GYPA-214ENST00000641688 CHMP7Q8WUX9 453 aaPredicted RBP10.88□□□□□ -0.67
GYPA-214ENST00000641688 PCGF6Q9BYE7 350 aa10.86□□□□□ -0.67
GYPA-214ENST00000641688 GRIN2BQ13224 1484 aa10.84□□□□□ -0.67
GYPA-214ENST00000641688 GAPVD1Q14C86 1478 aa10.84□□□□□ -0.67
GYPA-214ENST00000641688 WDR97A6NE52 1622 aa10.84□□□□□ -0.67
GYPA-214ENST00000641688 SYNJ1O43426 1573 aa10.82□□□□□ -0.68
GYPA-214ENST00000641688 WRNQ14191 1432 aaPredicted RBP eCLIP10.82□□□□□ -0.68
GYPA-214ENST00000641688 PBRM1Q86U86 1689 aa10.82□□□□□ -0.68
GYPA-214ENST00000641688 ABCA10Q8WWZ4 1543 aa10.81□□□□□ -0.68
GYPA-214ENST00000641688 ARAP1Q96P48 1450 aa10.8□□□□□ -0.68
GYPA-214ENST00000641688 MAGI1Q96QZ7 1491 aaPredicted RBP10.8□□□□□ -0.68
GYPA-214ENST00000641688 SYNJ2O15056 1496 aa10.79□□□□□ -0.68
GYPA-214ENST00000641688 TOP2BQ02880 1626 aa10.78□□□□□ -0.68
GYPA-214ENST00000641688 ABCA5Q8WWZ7 1642 aa10.78□□□□□ -0.68
GYPA-214ENST00000641688 BIVM-ERCC5R4GMW8 1640 aa10.77□□□□□ -0.69
GYPA-214ENST00000641688 CLASP1Q7Z460 1538 aa10.77□□□□□ -0.69
GYPA-214ENST00000641688 LOC105371045A0A1W2PR82 267 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms