RNA–Protein interactions for RNA: ENST00000641497.1

AF228730.6-201, humanhuman

BASIC

Gene AF228730.6, Length 218 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF228730.6-201ENST00000641497 NISCHQ9Y2I1 1504 aa40.31■■■■■ 4.04
AF228730.6-201ENST00000641497 ABCC9O60706 1549 aa36.94■■■■□ 3.5
AF228730.6-201ENST00000641497 CCDC180Q9P1Z9 1646 aa36.32■■■■□ 3.4
AF228730.6-201ENST00000641497 DNAJC5BQ9UF47 199 aa35.2■■■■□ 3.23
AF228730.6-201ENST00000641497 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
AF228730.6-201ENST00000641497 NACADO15069 1562 aa34.52■■■■□ 3.12
AF228730.6-201ENST00000641497 PABPN1Q86U42 306 aaKnown RBP eCLIP34.34■■■■□ 3.09
AF228730.6-201ENST00000641497 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
AF228730.6-201ENST00000641497 UNC13AQ9UPW8 1703 aa33.99■■■■□ 3.03
AF228730.6-201ENST00000641497 BICRAQ9NZM4 1560 aa33.91■■■■□ 3.02
AF228730.6-201ENST00000641497 MYO15BQ96JP2 1530 aa33.89■■■■□ 3.02
AF228730.6-201ENST00000641497 SHROOM4Q9ULL8 1493 aa33.39■■■□□ 2.94
AF228730.6-201ENST00000641497 CECR2Q9BXF3 1484 aa33.33■■■□□ 2.93
AF228730.6-201ENST00000641497 CC2D2AQ9P2K1 1620 aa33.3■■■□□ 2.92
AF228730.6-201ENST00000641497 ZCCHC6Q5VYS8 1495 aaKnown RBP33.3■■■□□ 2.92
AF228730.6-201ENST00000641497 DCAF1Q9Y4B6 1507 aa33.26■■■□□ 2.91
AF228730.6-201ENST00000641497 EIF4G1Q04637 1599 aaKnown RBP33.11■■■□□ 2.89
AF228730.6-201ENST00000641497 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
AF228730.6-201ENST00000641497 DNAJC5Q9H3Z4 198 aa32.7■■■□□ 2.83
AF228730.6-201ENST00000641497 CUX2O14529 1486 aa32.04■■■□□ 2.72
AF228730.6-201ENST00000641497 NCAPD3P42695 1498 aa31.93■■■□□ 2.7
AF228730.6-201ENST00000641497 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
AF228730.6-201ENST00000641497 ATAD2BQ9ULI0 1458 aa31.75■■■□□ 2.67
AF228730.6-201ENST00000641497 HMGXB3Q12766 1538 aa31.59■■■□□ 2.65
AF228730.6-201ENST00000641497 NESP48681 1621 aa31.58■■■□□ 2.65
AF228730.6-201ENST00000641497 SMARCA2P51531 1590 aa31.58■■■□□ 2.65
AF228730.6-201ENST00000641497 SMARCA4P51532 1647 aa31.52■■■□□ 2.64
AF228730.6-201ENST00000641497 BAZ1BQ9UIG0 1483 aaKnown RBP31.38■■■□□ 2.61
AF228730.6-201ENST00000641497 THOC2Q8NI27 1593 aaKnown RBP31.32■■■□□ 2.6
AF228730.6-201ENST00000641497 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
AF228730.6-201ENST00000641497 PEG3Q9GZU2 1588 aa31.25■■■□□ 2.59
AF228730.6-201ENST00000641497 LAMC3Q9Y6N6 1575 aa31.22■■■□□ 2.59
AF228730.6-201ENST00000641497 PDS5BQ9NTI5 1447 aa31.11■■■□□ 2.57
AF228730.6-201ENST00000641497 MROH2BQ7Z745 1585 aa31.06■■■□□ 2.56
AF228730.6-201ENST00000641497 KIF21AQ7Z4S6 1674 aa31.06■■■□□ 2.56
AF228730.6-201ENST00000641497 TRIM41Q8WV44 630 aa31■■■□□ 2.55
AF228730.6-201ENST00000641497 CADPSQ9ULU8 1353 aa30.93■■■□□ 2.54
AF228730.6-201ENST00000641497 MRC2Q9UBG0 1479 aa30.87■■■□□ 2.53
AF228730.6-201ENST00000641497 WDR62O43379 1518 aa30.8■■■□□ 2.52
AF228730.6-201ENST00000641497 CEP164Q9UPV0 1460 aa30.62■■■□□ 2.49
AF228730.6-201ENST00000641497 WIZO95785 1651 aa30.61■■■□□ 2.49
AF228730.6-201ENST00000641497 FANCD2Q9BXW9 1451 aa30.57■■■□□ 2.48
AF228730.6-201ENST00000641497 OSCARQ8IYS5 282 aa30.53■■■□□ 2.48
AF228730.6-201ENST00000641497 CFTRP13569 1480 aa30.46■■■□□ 2.47
AF228730.6-201ENST00000641497 URB2Q14146 1524 aaKnown RBP30.35■■■□□ 2.45
AF228730.6-201ENST00000641497 RSF1Q96T23 1441 aaPredicted RBP30.25■■■□□ 2.43
AF228730.6-201ENST00000641497 TOP2AP11388 1531 aaKnown RBP30.22■■■□□ 2.43
AF228730.6-201ENST00000641497 RIMBP3CA6NJZ7 1639 aa30.12■■■□□ 2.41
AF228730.6-201ENST00000641497 RIMBP3BA6NNM3 1639 aa30.12■■■□□ 2.41
AF228730.6-201ENST00000641497 RIMBP3Q9UFD9 1639 aa30.12■■■□□ 2.41
AF228730.6-201ENST00000641497 ZNF608Q9ULD9 1512 aaPredicted RBP30.07■■■□□ 2.4
AF228730.6-201ENST00000641497 IFT140Q96RY7 1462 aa30.06■■■□□ 2.4
AF228730.6-201ENST00000641497 ARHGEF11O15085 1522 aa30.01■■■□□ 2.39
AF228730.6-201ENST00000641497 PRDM2Q13029 1718 aa29.94■■■□□ 2.38
AF228730.6-201ENST00000641497 TOPBP1Q92547 1522 aa29.92■■■□□ 2.38
AF228730.6-201ENST00000641497 CCDC88BA6NC98 1476 aa29.91■■■□□ 2.38
AF228730.6-201ENST00000641497 CYB5RLQ6IPT4 315 aa29.85■■■□□ 2.37
AF228730.6-201ENST00000641497 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
AF228730.6-201ENST00000641497 ABCC8Q09428 1581 aa29.8■■■□□ 2.36
AF228730.6-201ENST00000641497 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.35
AF228730.6-201ENST00000641497 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
AF228730.6-201ENST00000641497 ARAP1Q96P48 1450 aa29.69■■■□□ 2.34
AF228730.6-201ENST00000641497 TRHP20396 242 aaPredicted RBP29.67■■■□□ 2.34
AF228730.6-201ENST00000641497 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
AF228730.6-201ENST00000641497 CHD1O14646 1710 aa29.65■■■□□ 2.34
AF228730.6-201ENST00000641497 FBLN2P98095 1184 aa29.64■■■□□ 2.34
AF228730.6-201ENST00000641497 POLA1P09884 1462 aaPredicted RBP29.58■■■□□ 2.33
AF228730.6-201ENST00000641497 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
AF228730.6-201ENST00000641497 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
AF228730.6-201ENST00000641497 SOGA1O94964 1423 aa29.45■■■□□ 2.31
AF228730.6-201ENST00000641497 SNAPC4Q5SXM2 1469 aa29.39■■■□□ 2.3
AF228730.6-201ENST00000641497 CLASP1Q7Z460 1538 aa29.38■■■□□ 2.29
AF228730.6-201ENST00000641497 CHMP7Q8WUX9 453 aaPredicted RBP29.34■■■□□ 2.29
AF228730.6-201ENST00000641497 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
AF228730.6-201ENST00000641497 WDR97A6NE52 1622 aa29.3■■■□□ 2.28
AF228730.6-201ENST00000641497 MAGI1Q96QZ7 1491 aaPredicted RBP29.29■■■□□ 2.28
AF228730.6-201ENST00000641497 SYNJ1O43426 1573 aa29.28■■■□□ 2.28
AF228730.6-201ENST00000641497 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
AF228730.6-201ENST00000641497 SYNJ2O15056 1496 aa29.21■■■□□ 2.27
AF228730.6-201ENST00000641497 CUX1P39880 1505 aa29.2■■■□□ 2.27
AF228730.6-201ENST00000641497 AEBP2Q6ZN18 517 aaPredicted RBP29.19■■■□□ 2.26
AF228730.6-201ENST00000641497 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
AF228730.6-201ENST00000641497 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
AF228730.6-201ENST00000641497 ABCA10Q8WWZ4 1543 aa28.96■■■□□ 2.23
AF228730.6-201ENST00000641497 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
AF228730.6-201ENST00000641497 ERCC6L2Q5T890 1561 aa28.89■■■□□ 2.22
AF228730.6-201ENST00000641497 GRIN2AQ12879 1464 aa28.86■■■□□ 2.21
AF228730.6-201ENST00000641497 NUP160Q12769 1436 aa28.81■■■□□ 2.2
AF228730.6-201ENST00000641497 CEP170Q5SW79 1584 aa28.79■■■□□ 2.2
AF228730.6-201ENST00000641497 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
AF228730.6-201ENST00000641497 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
AF228730.6-201ENST00000641497 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
AF228730.6-201ENST00000641497 SHROOM2Q13796 1616 aa28.69■■■□□ 2.18
AF228730.6-201ENST00000641497 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
AF228730.6-201ENST00000641497 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
AF228730.6-201ENST00000641497 TOP2BQ02880 1626 aa28.56■■■□□ 2.16
AF228730.6-201ENST00000641497 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
AF228730.6-201ENST00000641497 KIF13AQ9H1H9 1805 aa28.55■■■□□ 2.16
AF228730.6-201ENST00000641497 BIVM-ERCC5R4GMW8 1640 aa28.54■■■□□ 2.16
AF228730.6-201ENST00000641497 JPH4Q96JJ6 628 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms