RNA–Protein interactions for RNA: ENST00000641437.1

MTHFR-211, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 1,911 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-211ENST00000641437 NISCHQ9Y2I1 1504 aa37.42■■■■□ 3.58
MTHFR-211ENST00000641437 CCDC180Q9P1Z9 1646 aa32.68■■■□□ 2.82
MTHFR-211ENST00000641437 ZCCHC6Q5VYS8 1495 aaKnown RBP31.47■■■□□ 2.63
MTHFR-211ENST00000641437 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
MTHFR-211ENST00000641437 ABCC9O60706 1549 aa30.77■■■□□ 2.52
MTHFR-211ENST00000641437 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
MTHFR-211ENST00000641437 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
MTHFR-211ENST00000641437 SHROOM4Q9ULL8 1493 aa30.42■■■□□ 2.46
MTHFR-211ENST00000641437 NACADO15069 1562 aa30.37■■■□□ 2.45
MTHFR-211ENST00000641437 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
MTHFR-211ENST00000641437 SCRIBQ14160 1630 aa30■■■□□ 2.39
MTHFR-211ENST00000641437 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
MTHFR-211ENST00000641437 BICRAQ9NZM4 1560 aa29.27■■■□□ 2.28
MTHFR-211ENST00000641437 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
MTHFR-211ENST00000641437 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
MTHFR-211ENST00000641437 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.24
MTHFR-211ENST00000641437 PABPN1Q86U42 306 aaKnown RBP eCLIP28.96■■■□□ 2.23
MTHFR-211ENST00000641437 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
MTHFR-211ENST00000641437 BAZ1AQ9NRL2 1556 aaPredicted RBP28.88■■■□□ 2.21
MTHFR-211ENST00000641437 SMARCA4P51532 1647 aa28.79■■■□□ 2.2
MTHFR-211ENST00000641437 WIZO95785 1651 aa28.7■■■□□ 2.19
MTHFR-211ENST00000641437 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
MTHFR-211ENST00000641437 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.13
MTHFR-211ENST00000641437 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
MTHFR-211ENST00000641437 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
MTHFR-211ENST00000641437 SMARCA2P51531 1590 aa28.25■■■□□ 2.11
MTHFR-211ENST00000641437 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
MTHFR-211ENST00000641437 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
MTHFR-211ENST00000641437 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
MTHFR-211ENST00000641437 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
MTHFR-211ENST00000641437 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
MTHFR-211ENST00000641437 CC2D2AQ9P2K1 1620 aa27.91■■■□□ 2.06
MTHFR-211ENST00000641437 ABCC8Q09428 1581 aa27.51■■□□□ 1.99
MTHFR-211ENST00000641437 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
MTHFR-211ENST00000641437 CFTRP13569 1480 aa27.41■■□□□ 1.98
MTHFR-211ENST00000641437 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
MTHFR-211ENST00000641437 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
MTHFR-211ENST00000641437 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
MTHFR-211ENST00000641437 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
MTHFR-211ENST00000641437 DNAJC5BQ9UF47 199 aa27.16■■□□□ 1.94
MTHFR-211ENST00000641437 BIVM-ERCC5R4GMW8 1640 aa27.13■■□□□ 1.93
MTHFR-211ENST00000641437 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
MTHFR-211ENST00000641437 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
MTHFR-211ENST00000641437 NESP48681 1621 aa27.07■■□□□ 1.92
MTHFR-211ENST00000641437 CUX1P39880 1505 aa27.04■■□□□ 1.92
MTHFR-211ENST00000641437 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
MTHFR-211ENST00000641437 FAM9AQ8IZU1 332 aaPredicted RBP26.96■■□□□ 1.91
MTHFR-211ENST00000641437 SOGA1O94964 1423 aa26.96■■□□□ 1.91
MTHFR-211ENST00000641437 LOC105371045A0A1W2PR82 267 aa26.95■■□□□ 1.9
MTHFR-211ENST00000641437 EEA1Q15075 1411 aa26.89■■□□□ 1.89
MTHFR-211ENST00000641437 RUSC2Q8N2Y8 1516 aa26.88■■□□□ 1.89
MTHFR-211ENST00000641437 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
MTHFR-211ENST00000641437 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
MTHFR-211ENST00000641437 PDS5BQ9NTI5 1447 aa26.79■■□□□ 1.88
MTHFR-211ENST00000641437 DNMBPQ6XZF7 1577 aa26.79■■□□□ 1.88
MTHFR-211ENST00000641437 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
MTHFR-211ENST00000641437 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
MTHFR-211ENST00000641437 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
MTHFR-211ENST00000641437 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
MTHFR-211ENST00000641437 KIF21BO75037 1637 aa26.62■■□□□ 1.85
MTHFR-211ENST00000641437 POLA1P09884 1462 aaPredicted RBP26.59■■□□□ 1.85
MTHFR-211ENST00000641437 KIF27Q86VH2 1401 aa26.57■■□□□ 1.84
MTHFR-211ENST00000641437 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
MTHFR-211ENST00000641437 GOLGA3Q08378 1498 aa26.53■■□□□ 1.84
MTHFR-211ENST00000641437 CUX2O14529 1486 aa26.51■■□□□ 1.83
MTHFR-211ENST00000641437 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
MTHFR-211ENST00000641437 MRC2Q9UBG0 1479 aa26.5■■□□□ 1.83
MTHFR-211ENST00000641437 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
MTHFR-211ENST00000641437 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
MTHFR-211ENST00000641437 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
MTHFR-211ENST00000641437 TNIKQ9UKE5 1360 aa26.43■■□□□ 1.82
MTHFR-211ENST00000641437 RAPGEF2Q9Y4G8 1499 aa26.42■■□□□ 1.82
MTHFR-211ENST00000641437 ERICH3Q5RHP9 1530 aa26.42■■□□□ 1.82
MTHFR-211ENST00000641437 WDR62O43379 1518 aa26.41■■□□□ 1.82
MTHFR-211ENST00000641437 TARBP1Q13395 1621 aaKnown RBP26.37■■□□□ 1.81
MTHFR-211ENST00000641437 THOC2Q8NI27 1593 aaKnown RBP26.36■■□□□ 1.81
MTHFR-211ENST00000641437 IGF1RP08069 1367 aa26.34■■□□□ 1.81
MTHFR-211ENST00000641437 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
MTHFR-211ENST00000641437 ABCA5Q8WWZ7 1642 aa26.33■■□□□ 1.81
MTHFR-211ENST00000641437 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
MTHFR-211ENST00000641437 UBTFP17480 764 aaKnown RBP26.29■■□□□ 1.8
MTHFR-211ENST00000641437 CUL7Q14999 1698 aa26.21■■□□□ 1.79
MTHFR-211ENST00000641437 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
MTHFR-211ENST00000641437 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
MTHFR-211ENST00000641437 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
MTHFR-211ENST00000641437 IFT140Q96RY7 1462 aa26.16■■□□□ 1.78
MTHFR-211ENST00000641437 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
MTHFR-211ENST00000641437 CLIP1P30622 1438 aa26.08■■□□□ 1.77
MTHFR-211ENST00000641437 ZNF608Q9ULD9 1512 aaPredicted RBP26.05■■□□□ 1.76
MTHFR-211ENST00000641437 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.761e-6■□□□□ 11.2
MTHFR-211ENST00000641437 EIF4G3O43432 1585 aaKnown RBP26■■□□□ 1.75
MTHFR-211ENST00000641437 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
MTHFR-211ENST00000641437 ADAMTS12P58397 1594 aa25.97■■□□□ 1.75
MTHFR-211ENST00000641437 CTTNBP2Q8WZ74 1663 aa25.95■■□□□ 1.75
MTHFR-211ENST00000641437 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
MTHFR-211ENST00000641437 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
MTHFR-211ENST00000641437 VPS8Q8N3P4 1428 aa25.88■■□□□ 1.73
MTHFR-211ENST00000641437 ARHGAP35Q9NRY4 1499 aa25.88■■□□□ 1.73
MTHFR-211ENST00000641437 RANGAP1P46060 587 aaPredicted RBP25.84■■□□□ 1.73
MTHFR-211ENST00000641437 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 209.2 ms