RNA–Protein interactions for RNA: ENST00000641414.1

CASC19-228, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-228ENST00000641414 NISCHQ9Y2I1 1504 aa14.79□□□□□ -0.04
CASC19-228ENST00000641414 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.11
CASC19-228ENST00000641414 CHIC1Q5VXU3 224 aa13.98□□□□□ -0.17
CASC19-228ENST00000641414 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
CASC19-228ENST00000641414 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
CASC19-228ENST00000641414 DCAF8L2P0C7V8 631 aa12.33□□□□□ -0.44
CASC19-228ENST00000641414 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
CASC19-228ENST00000641414 DCAF1Q9Y4B6 1507 aa12.22□□□□□ -0.45
CASC19-228ENST00000641414 ABCC9O60706 1549 aa12.21□□□□□ -0.45
CASC19-228ENST00000641414 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
CASC19-228ENST00000641414 SHROOM4Q9ULL8 1493 aa12.13□□□□□ -0.47
CASC19-228ENST00000641414 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
CASC19-228ENST00000641414 NACADO15069 1562 aa12.02□□□□□ -0.49
CASC19-228ENST00000641414 RB1CC1Q8TDY2 1594 aa11.93□□□□□ -0.5
CASC19-228ENST00000641414 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
CASC19-228ENST00000641414 POTEDQ86YR6 584 aa11.8□□□□□ -0.52
CASC19-228ENST00000641414 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.54
CASC19-228ENST00000641414 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
CASC19-228ENST00000641414 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASC19-228ENST00000641414 BICRAQ9NZM4 1560 aa11.5□□□□□ -0.57
CASC19-228ENST00000641414 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
CASC19-228ENST00000641414 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
CASC19-228ENST00000641414 BAZ1AQ9NRL2 1556 aaPredicted RBP11.44□□□□□ -0.58
CASC19-228ENST00000641414 MROH2BQ7Z745 1585 aa11.42□□□□□ -0.58
CASC19-228ENST00000641414 SMARCA4P51532 1647 aa11.37□□□□□ -0.59
CASC19-228ENST00000641414 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
CASC19-228ENST00000641414 WIZO95785 1651 aa11.33□□□□□ -0.6
CASC19-228ENST00000641414 FOXD1Q16676 465 aa11.32□□□□□ -0.6
CASC19-228ENST00000641414 TOP2AP11388 1531 aaKnown RBP11.23□□□□□ -0.61
CASC19-228ENST00000641414 PEG3Q9GZU2 1588 aa11.21□□□□□ -0.62
CASC19-228ENST00000641414 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
CASC19-228ENST00000641414 EIF4G1Q04637 1599 aaKnown RBP11.2□□□□□ -0.62
CASC19-228ENST00000641414 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
CASC19-228ENST00000641414 BAZ1BQ9UIG0 1483 aaKnown RBP11.15□□□□□ -0.62
CASC19-228ENST00000641414 CCDC88BA6NC98 1476 aa11.11□□□□□ -0.63
CASC19-228ENST00000641414 NCAPD3P42695 1498 aa11.08□□□□□ -0.64
CASC19-228ENST00000641414 HMGXB3Q12766 1538 aa11.07□□□□□ -0.64
CASC19-228ENST00000641414 CC2D2AQ9P2K1 1620 aa11.03□□□□□ -0.64
CASC19-228ENST00000641414 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
CASC19-228ENST00000641414 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
CASC19-228ENST00000641414 CFTRP13569 1480 aa10.84□□□□□ -0.67
CASC19-228ENST00000641414 WRNQ14191 1432 aaPredicted RBP eCLIP10.84□□□□□ -0.67
CASC19-228ENST00000641414 ADRA2BP18089 450 aa10.84□□□□□ -0.67
CASC19-228ENST00000641414 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
CASC19-228ENST00000641414 CADPSQ9ULU8 1353 aa10.82□□□□□ -0.68
CASC19-228ENST00000641414 FAM9AQ8IZU1 332 aaPredicted RBP10.82□□□□□ -0.68
CASC19-228ENST00000641414 PRDM2Q13029 1718 aa10.77□□□□□ -0.68
CASC19-228ENST00000641414 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
CASC19-228ENST00000641414 LOC105371045A0A1W2PR82 267 aa10.75□□□□□ -0.69
CASC19-228ENST00000641414 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
CASC19-228ENST00000641414 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
CASC19-228ENST00000641414 LAMC3Q9Y6N6 1575 aa10.72□□□□□ -0.69
CASC19-228ENST00000641414 FANCD2Q9BXW9 1451 aa10.71□□□□□ -0.7
CASC19-228ENST00000641414 NESP48681 1621 aa10.7□□□□□ -0.7
CASC19-228ENST00000641414 EEA1Q15075 1411 aa10.7□□□□□ -0.7
CASC19-228ENST00000641414 BIVM-ERCC5R4GMW8 1640 aa10.7□□□□□ -0.7
CASC19-228ENST00000641414 PIAS4Q8N2W9 510 aaPredicted RBP10.69□□□□□ -0.7
CASC19-228ENST00000641414 SOGA1O94964 1423 aa10.69□□□□□ -0.7
CASC19-228ENST00000641414 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
CASC19-228ENST00000641414 CUX1P39880 1505 aa10.68□□□□□ -0.7
CASC19-228ENST00000641414 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
CASC19-228ENST00000641414 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
CASC19-228ENST00000641414 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.71
CASC19-228ENST00000641414 RUSC2Q8N2Y8 1516 aa10.63□□□□□ -0.71
CASC19-228ENST00000641414 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
CASC19-228ENST00000641414 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
CASC19-228ENST00000641414 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
CASC19-228ENST00000641414 TOPBP1Q92547 1522 aa10.57□□□□□ -0.72
CASC19-228ENST00000641414 KIF21AQ7Z4S6 1674 aa10.57□□□□□ -0.72
CASC19-228ENST00000641414 UBTFP17480 764 aaKnown RBP10.57□□□□□ -0.72
CASC19-228ENST00000641414 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
CASC19-228ENST00000641414 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
CASC19-228ENST00000641414 CUX2O14529 1486 aa10.53□□□□□ -0.72
CASC19-228ENST00000641414 POLA1P09884 1462 aaPredicted RBP10.53□□□□□ -0.72
CASC19-228ENST00000641414 KIF21BO75037 1637 aa10.52□□□□□ -0.72
CASC19-228ENST00000641414 ERCC6Q03468 1493 aa10.51□□□□□ -0.73
CASC19-228ENST00000641414 TNIKQ9UKE5 1360 aa10.51□□□□□ -0.73
CASC19-228ENST00000641414 MRC2Q9UBG0 1479 aa10.51□□□□□ -0.73
CASC19-228ENST00000641414 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
CASC19-228ENST00000641414 MSH5O43196 834 aa10.49□□□□□ -0.73
CASC19-228ENST00000641414 ABCA10Q8WWZ4 1543 aa10.48□□□□□ -0.73
CASC19-228ENST00000641414 RAPGEF2Q9Y4G8 1499 aa10.48□□□□□ -0.73
CASC19-228ENST00000641414 ERICH3Q5RHP9 1530 aa10.46□□□□□ -0.73
CASC19-228ENST00000641414 PRXQ9BXM0 1461 aa10.46□□□□□ -0.73
CASC19-228ENST00000641414 CEP162Q5TB80 1403 aa10.46□□□□□ -0.73
CASC19-228ENST00000641414 IGF1RP08069 1367 aa10.45□□□□□ -0.74
CASC19-228ENST00000641414 CARMIL1Q5VZK9 1371 aa10.43□□□□□ -0.74
CASC19-228ENST00000641414 WDR62O43379 1518 aa10.42□□□□□ -0.74
CASC19-228ENST00000641414 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
CASC19-228ENST00000641414 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
CASC19-228ENST00000641414 RANGAP1P46060 587 aaPredicted RBP10.4□□□□□ -0.74
CASC19-228ENST00000641414 GAPVD1Q14C86 1478 aa10.4□□□□□ -0.75
CASC19-228ENST00000641414 CLIP1P30622 1438 aa10.39□□□□□ -0.75
CASC19-228ENST00000641414 TARBP1Q13395 1621 aaKnown RBP10.39□□□□□ -0.75
CASC19-228ENST00000641414 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
CASC19-228ENST00000641414 CUL7Q14999 1698 aa10.38□□□□□ -0.75
CASC19-228ENST00000641414 ABCA5Q8WWZ7 1642 aa10.37□□□□□ -0.75
CASC19-228ENST00000641414 THOC2Q8NI27 1593 aaKnown RBP10.37□□□□□ -0.75
CASC19-228ENST00000641414 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.763e-6■■■■□ 24.7
CASC19-228ENST00000641414 GRIN2BQ13224 1484 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms