RNA–Protein interactions for RNA: ENST00000641106.1

CASC19-211, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,184 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-211ENST00000641106 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
CASC19-211ENST00000641106 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
CASC19-211ENST00000641106 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
CASC19-211ENST00000641106 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
CASC19-211ENST00000641106 FOXD1Q16676 465 aa20.94■□□□□ 0.94
CASC19-211ENST00000641106 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
CASC19-211ENST00000641106 MSH5O43196 834 aa19.61■□□□□ 0.73
CASC19-211ENST00000641106 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
CASC19-211ENST00000641106 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
CASC19-211ENST00000641106 ADRA2BP18089 450 aa19.43■□□□□ 0.7
CASC19-211ENST00000641106 POTEDQ86YR6 584 aa19.38■□□□□ 0.69
CASC19-211ENST00000641106 NISCHQ9Y2I1 1504 aa18.03■□□□□ 0.48
CASC19-211ENST00000641106 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
CASC19-211ENST00000641106 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
CASC19-211ENST00000641106 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
CASC19-211ENST00000641106 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
CASC19-211ENST00000641106 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
CASC19-211ENST00000641106 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
CASC19-211ENST00000641106 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
CASC19-211ENST00000641106 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
CASC19-211ENST00000641106 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
CASC19-211ENST00000641106 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
CASC19-211ENST00000641106 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
CASC19-211ENST00000641106 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
CASC19-211ENST00000641106 C1QBPQ07021 282 aaKnown RBP16.48■□□□□ 0.23
CASC19-211ENST00000641106 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
CASC19-211ENST00000641106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
CASC19-211ENST00000641106 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
CASC19-211ENST00000641106 ABCC9O60706 1549 aa16.09■□□□□ 0.17
CASC19-211ENST00000641106 KCNA4P22459 653 aa15.98■□□□□ 0.15
CASC19-211ENST00000641106 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
CASC19-211ENST00000641106 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
CASC19-211ENST00000641106 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
CASC19-211ENST00000641106 CAPN15O75808 1086 aa15.68■□□□□ 0.1
CASC19-211ENST00000641106 DSG3P32926 999 aa15.64■□□□□ 0.09
CASC19-211ENST00000641106 APLP2Q06481 763 aa15.41■□□□□ 0.06
CASC19-211ENST00000641106 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
CASC19-211ENST00000641106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
CASC19-211ENST00000641106 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
CASC19-211ENST00000641106 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
CASC19-211ENST00000641106 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
CASC19-211ENST00000641106 ABCB7O75027 752 aa15.32■□□□□ 0.04
CASC19-211ENST00000641106 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
CASC19-211ENST00000641106 NACADO15069 1562 aa15.24■□□□□ 0.03
CASC19-211ENST00000641106 POTEHQ6S545 545 aa15.15■□□□□ 0.02
CASC19-211ENST00000641106 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
CASC19-211ENST00000641106 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
CASC19-211ENST00000641106 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
CASC19-211ENST00000641106 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
CASC19-211ENST00000641106 DCAF8L2P0C7V8 631 aa15.04■□□□□ -0
CASC19-211ENST00000641106 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
CASC19-211ENST00000641106 ZCCHC6Q5VYS8 1495 aaKnown RBP14.99□□□□□ -0.01
CASC19-211ENST00000641106 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
CASC19-211ENST00000641106 POLA2Q14181 598 aa14.98□□□□□ -0.01
CASC19-211ENST00000641106 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
CASC19-211ENST00000641106 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
CASC19-211ENST00000641106 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
CASC19-211ENST00000641106 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
CASC19-211ENST00000641106 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
CASC19-211ENST00000641106 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
CASC19-211ENST00000641106 ZBTB22O15209 634 aa14.71□□□□□ -0.05
CASC19-211ENST00000641106 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
CASC19-211ENST00000641106 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
CASC19-211ENST00000641106 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
CASC19-211ENST00000641106 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
CASC19-211ENST00000641106 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
CASC19-211ENST00000641106 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
CASC19-211ENST00000641106 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
CASC19-211ENST00000641106 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
CASC19-211ENST00000641106 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
CASC19-211ENST00000641106 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
CASC19-211ENST00000641106 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
CASC19-211ENST00000641106 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
CASC19-211ENST00000641106 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
CASC19-211ENST00000641106 FBLN2P98095 1184 aa14.23□□□□□ -0.13
CASC19-211ENST00000641106 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
CASC19-211ENST00000641106 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
CASC19-211ENST00000641106 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
CASC19-211ENST00000641106 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
CASC19-211ENST00000641106 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
CASC19-211ENST00000641106 SP7Q8TDD2 431 aaPredicted RBP14.14□□□□□ -0.15
CASC19-211ENST00000641106 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
CASC19-211ENST00000641106 NCAPD3P42695 1498 aa14.07□□□□□ -0.16
CASC19-211ENST00000641106 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
CASC19-211ENST00000641106 HAX1O00165 279 aa14.03□□□□□ -0.16
CASC19-211ENST00000641106 HMGXB3Q12766 1538 aa14□□□□□ -0.17
CASC19-211ENST00000641106 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
CASC19-211ENST00000641106 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
CASC19-211ENST00000641106 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
CASC19-211ENST00000641106 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
CASC19-211ENST00000641106 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
CASC19-211ENST00000641106 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.18
CASC19-211ENST00000641106 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
CASC19-211ENST00000641106 MROH2BQ7Z745 1585 aa13.93□□□□□ -0.18
CASC19-211ENST00000641106 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
CASC19-211ENST00000641106 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
CASC19-211ENST00000641106 EVX2Q03828 476 aa13.89□□□□□ -0.19
CASC19-211ENST00000641106 NESP48681 1621 aa13.89□□□□□ -0.19
CASC19-211ENST00000641106 CUX2O14529 1486 aa13.84□□□□□ -0.19
CASC19-211ENST00000641106 ERCC6Q03468 1493 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms