RNA–Protein interactions for RNA: ENST00000640473.1

MED17-226, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 705 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-226ENST00000640473 NISCHQ9Y2I1 1504 aa55.15■■■■■ 6.42
MED17-226ENST00000640473 CCDC180Q9P1Z9 1646 aa49.23■■■■■ 5.47
MED17-226ENST00000640473 ABCC9O60706 1549 aa48.57■■■■■ 5.37
MED17-226ENST00000640473 RB1CC1Q8TDY2 1594 aa46.56■■■■■ 5.04
MED17-226ENST00000640473 NACADO15069 1562 aa46.42■■■■■ 5.02
MED17-226ENST00000640473 DCAF8L2P0C7V8 631 aa46.17■■■■■ 4.98
MED17-226ENST00000640473 MYO15BQ96JP2 1530 aa46.04■■■■■ 4.96
MED17-226ENST00000640473 ZCCHC6Q5VYS8 1495 aaKnown RBP45.83■■■■■ 4.93
MED17-226ENST00000640473 DCAF1Q9Y4B6 1507 aa45.66■■■■■ 4.9
MED17-226ENST00000640473 UNC13AQ9UPW8 1703 aa45.47■■■■■ 4.87
MED17-226ENST00000640473 PABPN1Q86U42 306 aaKnown RBP eCLIP45.3■■■■■ 4.84
MED17-226ENST00000640473 BICRAQ9NZM4 1560 aa45.18■■■■■ 4.82
MED17-226ENST00000640473 DNAJC5BQ9UF47 199 aa45.04■■■■■ 4.8
MED17-226ENST00000640473 SCRIBQ14160 1630 aa44.81■■■■■ 4.76
MED17-226ENST00000640473 SHROOM4Q9ULL8 1493 aa44.72■■■■■ 4.75
MED17-226ENST00000640473 EIF4G1Q04637 1599 aaKnown RBP44.01■■■■■ 4.64
MED17-226ENST00000640473 CC2D2AQ9P2K1 1620 aa43.94■■■■■ 4.62
MED17-226ENST00000640473 CECR2Q9BXF3 1484 aa43.72■■■■■ 4.59
MED17-226ENST00000640473 SMARCA4P51532 1647 aa42.86■■■■■ 4.45
MED17-226ENST00000640473 NCAPD3P42695 1498 aa42.86■■■■■ 4.45
MED17-226ENST00000640473 ATAD2BQ9ULI0 1458 aa42.78■■■■■ 4.44
MED17-226ENST00000640473 BAZ1AQ9NRL2 1556 aaPredicted RBP42.77■■■■■ 4.44
MED17-226ENST00000640473 SMARCA2P51531 1590 aa42.7■■■■■ 4.43
MED17-226ENST00000640473 HMGXB3Q12766 1538 aa42.58■■■■■ 4.41
MED17-226ENST00000640473 PEG3Q9GZU2 1588 aa42.51■■■■■ 4.4
MED17-226ENST00000640473 MROH2BQ7Z745 1585 aa42.47■■■■■ 4.39
MED17-226ENST00000640473 BAZ1BQ9UIG0 1483 aaKnown RBP42.37■■■■■ 4.37
MED17-226ENST00000640473 WIZO95785 1651 aa41.96■■■■■ 4.31
MED17-226ENST00000640473 ERCC6Q03468 1493 aa41.91■■■■■ 4.3
MED17-226ENST00000640473 NESP48681 1621 aa41.9■■■■■ 4.3
MED17-226ENST00000640473 RSF1Q96T23 1441 aaPredicted RBP41.83■■■■■ 4.29
MED17-226ENST00000640473 LAMC3Q9Y6N6 1575 aa41.77■■■■■ 4.28
MED17-226ENST00000640473 CUX2O14529 1486 aa41.69■■■■■ 4.26
MED17-226ENST00000640473 CADPSQ9ULU8 1353 aa41.56■■■■■ 4.24
MED17-226ENST00000640473 TOP2AP11388 1531 aaKnown RBP41.52■■■■■ 4.24
MED17-226ENST00000640473 PDS5BQ9NTI5 1447 aa41.52■■■■■ 4.24
MED17-226ENST00000640473 THOC2Q8NI27 1593 aaKnown RBP41.39■■■■■ 4.22
MED17-226ENST00000640473 KIF21AQ7Z4S6 1674 aa41.38■■■■■ 4.21
MED17-226ENST00000640473 CFTRP13569 1480 aa41.22■■■■■ 4.19
MED17-226ENST00000640473 MRC2Q9UBG0 1479 aa41.09■■■■■ 4.17
MED17-226ENST00000640473 FANCD2Q9BXW9 1451 aa41.06■■■■■ 4.16
MED17-226ENST00000640473 CEP164Q9UPV0 1460 aa41.05■■■■■ 4.16
MED17-226ENST00000640473 CCDC88BA6NC98 1476 aa41.03■■■■■ 4.16
MED17-226ENST00000640473 WDR62O43379 1518 aa40.98■■■■■ 4.15
MED17-226ENST00000640473 DNAJC5Q9H3Z4 198 aa40.98■■■■■ 4.15
MED17-226ENST00000640473 PRDM2Q13029 1718 aa40.83■■■■■ 4.13
MED17-226ENST00000640473 URB2Q14146 1524 aaKnown RBP40.67■■■■■ 4.1
MED17-226ENST00000640473 ABCC8Q09428 1581 aa40.36■■■■■ 4.05
MED17-226ENST00000640473 TOPBP1Q92547 1522 aa40.36■■■■■ 4.05
MED17-226ENST00000640473 SUPT5HO00267 1087 aaKnown RBP40.34■■■■■ 4.05
MED17-226ENST00000640473 DNMBPQ6XZF7 1577 aa40.27■■■■■ 4.04
MED17-226ENST00000640473 IFT140Q96RY7 1462 aa40.23■■■■■ 4.03
MED17-226ENST00000640473 ZNF608Q9ULD9 1512 aaPredicted RBP40.06■■■■■ 4
MED17-226ENST00000640473 POLA1P09884 1462 aaPredicted RBP39.98■■■■□ 3.99
MED17-226ENST00000640473 TARBP1Q13395 1621 aaKnown RBP39.95■■■■□ 3.99
MED17-226ENST00000640473 OSCARQ8IYS5 282 aa39.87■■■■□ 3.97
MED17-226ENST00000640473 EIF4G3O43432 1585 aaKnown RBP39.87■■■■□ 3.97
MED17-226ENST00000640473 CUX1P39880 1505 aa39.86■■■■□ 3.97
MED17-226ENST00000640473 SOGA1O94964 1423 aa39.81■■■■□ 3.96
MED17-226ENST00000640473 FGD5Q6ZNL6 1462 aa39.8■■■■□ 3.96
MED17-226ENST00000640473 RAD54L2Q9Y4B4 1467 aa39.79■■■■□ 3.96
MED17-226ENST00000640473 AQRO60306 1485 aaKnown RBP eCLIP39.77■■■■□ 3.966e-9■■■□□ 16.2
MED17-226ENST00000640473 WDR97A6NE52 1622 aa39.65■■■■□ 3.94
MED17-226ENST00000640473 TDRD9Q8NDG6 1382 aaKnown RBP39.63■■■■□ 3.93
MED17-226ENST00000640473 WRNQ14191 1432 aaPredicted RBP eCLIP39.45■■■■□ 3.91
MED17-226ENST00000640473 CHD1O14646 1710 aa39.45■■■■□ 3.91
MED17-226ENST00000640473 ABCA10Q8WWZ4 1543 aa39.43■■■■□ 3.9
MED17-226ENST00000640473 TOP2BQ02880 1626 aa39.41■■■■□ 3.9
MED17-226ENST00000640473 GRIN2BQ13224 1484 aa39.41■■■■□ 3.9
MED17-226ENST00000640473 BIVM-ERCC5R4GMW8 1640 aa39.4■■■■□ 3.9
MED17-226ENST00000640473 SNAPC4Q5SXM2 1469 aa39.39■■■■□ 3.9
MED17-226ENST00000640473 MAGI1Q96QZ7 1491 aaPredicted RBP39.37■■■■□ 3.89
MED17-226ENST00000640473 FBLN2P98095 1184 aa39.35■■■■□ 3.89
MED17-226ENST00000640473 SYNJ1O43426 1573 aa39.34■■■■□ 3.89
MED17-226ENST00000640473 GAPVD1Q14C86 1478 aa39.34■■■■□ 3.89
MED17-226ENST00000640473 TRIM41Q8WV44 630 aa39.32■■■■□ 3.89
MED17-226ENST00000640473 ABCA5Q8WWZ7 1642 aa39.29■■■■□ 3.88
MED17-226ENST00000640473 PBRM1Q86U86 1689 aa39.25■■■■□ 3.87
MED17-226ENST00000640473 RIMBP3CA6NJZ7 1639 aa39.25■■■■□ 3.87
MED17-226ENST00000640473 RIMBP3BA6NNM3 1639 aa39.25■■■■□ 3.87
MED17-226ENST00000640473 RIMBP3Q9UFD9 1639 aa39.25■■■■□ 3.87
MED17-226ENST00000640473 CHMP7Q8WUX9 453 aaPredicted RBP39.21■■■■□ 3.87
MED17-226ENST00000640473 SYNJ2O15056 1496 aa39.21■■■■□ 3.87
MED17-226ENST00000640473 ARHGEF11O15085 1522 aa39.2■■■■□ 3.87
MED17-226ENST00000640473 CLASP1Q7Z460 1538 aa39.06■■■■□ 3.84
MED17-226ENST00000640473 ERICH3Q5RHP9 1530 aa38.94■■■■□ 3.82
MED17-226ENST00000640473 ADAMTS12P58397 1594 aa38.94■■■■□ 3.82
MED17-226ENST00000640473 GRIN2AQ12879 1464 aa38.89■■■■□ 3.82
MED17-226ENST00000640473 FHAD1B1AJZ9 1412 aa38.89■■■■□ 3.82
MED17-226ENST00000640473 ARAP1Q96P48 1450 aa38.86■■■■□ 3.81
MED17-226ENST00000640473 CYB5RLQ6IPT4 315 aa38.85■■■■□ 3.81
MED17-226ENST00000640473 NUP160Q12769 1436 aa38.77■■■■□ 3.8
MED17-226ENST00000640473 CEP170Q5SW79 1584 aa38.7■■■■□ 3.79
MED17-226ENST00000640473 KIF27Q86VH2 1401 aa38.66■■■■□ 3.78
MED17-226ENST00000640473 IGF1RP08069 1367 aa38.58■■■■□ 3.77
MED17-226ENST00000640473 SHROOM2Q13796 1616 aa38.52■■■■□ 3.76
MED17-226ENST00000640473 CUL7Q14999 1698 aa38.48■■■■□ 3.75
MED17-226ENST00000640473 ERCC6L2Q5T890 1561 aa38.44■■■■□ 3.74
MED17-226ENST00000640473 RUSC2Q8N2Y8 1516 aa38.37■■■■□ 3.73
MED17-226ENST00000640473 JPH4Q96JJ6 628 aa38.35■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms