RNA–Protein interactions for RNA: ENST00000640386.1

KCNMA1-282, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-282ENST00000640386 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
KCNMA1-282ENST00000640386 CCDC180Q9P1Z9 1646 aa20.77■□□□□ 0.92
KCNMA1-282ENST00000640386 ABCC9O60706 1549 aa20.53■□□□□ 0.88
KCNMA1-282ENST00000640386 RB1CC1Q8TDY2 1594 aa19.62■□□□□ 0.73
KCNMA1-282ENST00000640386 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
KCNMA1-282ENST00000640386 NACADO15069 1562 aa19.54■□□□□ 0.72
KCNMA1-282ENST00000640386 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
KCNMA1-282ENST00000640386 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
KCNMA1-282ENST00000640386 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
KCNMA1-282ENST00000640386 DCAF1Q9Y4B6 1507 aa19.22■□□□□ 0.67
KCNMA1-282ENST00000640386 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.66
KCNMA1-282ENST00000640386 BICRAQ9NZM4 1560 aa19.13■□□□□ 0.65
KCNMA1-282ENST00000640386 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
KCNMA1-282ENST00000640386 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
KCNMA1-282ENST00000640386 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
KCNMA1-282ENST00000640386 EIF4G1Q04637 1599 aaKnown RBP18.58■□□□□ 0.57
KCNMA1-282ENST00000640386 CC2D2AQ9P2K1 1620 aa18.57■□□□□ 0.56
KCNMA1-282ENST00000640386 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
KCNMA1-282ENST00000640386 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
KCNMA1-282ENST00000640386 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
KCNMA1-282ENST00000640386 NCAPD3P42695 1498 aa18.05■□□□□ 0.48
KCNMA1-282ENST00000640386 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
KCNMA1-282ENST00000640386 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
KCNMA1-282ENST00000640386 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
KCNMA1-282ENST00000640386 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
KCNMA1-282ENST00000640386 PEG3Q9GZU2 1588 aa17.93■□□□□ 0.46
KCNMA1-282ENST00000640386 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
KCNMA1-282ENST00000640386 WIZO95785 1651 aa17.82■□□□□ 0.44
KCNMA1-282ENST00000640386 NESP48681 1621 aa17.76■□□□□ 0.43
KCNMA1-282ENST00000640386 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
KCNMA1-282ENST00000640386 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
KCNMA1-282ENST00000640386 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
KCNMA1-282ENST00000640386 KIF21AQ7Z4S6 1674 aa17.56■□□□□ 0.4
KCNMA1-282ENST00000640386 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
KCNMA1-282ENST00000640386 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
KCNMA1-282ENST00000640386 CUX2O14529 1486 aa17.5■□□□□ 0.39
KCNMA1-282ENST00000640386 THOC2Q8NI27 1593 aaKnown RBP17.49■□□□□ 0.39
KCNMA1-282ENST00000640386 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
KCNMA1-282ENST00000640386 CFTRP13569 1480 aa17.39■□□□□ 0.37
KCNMA1-282ENST00000640386 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
KCNMA1-282ENST00000640386 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.36
KCNMA1-282ENST00000640386 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
KCNMA1-282ENST00000640386 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
KCNMA1-282ENST00000640386 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
KCNMA1-282ENST00000640386 WDR62O43379 1518 aa17.28■□□□□ 0.36
KCNMA1-282ENST00000640386 DNAJC5Q9H3Z4 198 aa17.22■□□□□ 0.35
KCNMA1-282ENST00000640386 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.34
KCNMA1-282ENST00000640386 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
KCNMA1-282ENST00000640386 TOPBP1Q92547 1522 aa17.04■□□□□ 0.32
KCNMA1-282ENST00000640386 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
KCNMA1-282ENST00000640386 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
KCNMA1-282ENST00000640386 ABCC8Q09428 1581 aa16.96■□□□□ 0.3
KCNMA1-282ENST00000640386 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
KCNMA1-282ENST00000640386 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
KCNMA1-282ENST00000640386 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
KCNMA1-282ENST00000640386 CUX1P39880 1505 aa16.88■□□□□ 0.29
KCNMA1-282ENST00000640386 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
KCNMA1-282ENST00000640386 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
KCNMA1-282ENST00000640386 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.28
KCNMA1-282ENST00000640386 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
KCNMA1-282ENST00000640386 SOGA1O94964 1423 aa16.8■□□□□ 0.28
KCNMA1-282ENST00000640386 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
KCNMA1-282ENST00000640386 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.27
KCNMA1-282ENST00000640386 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
KCNMA1-282ENST00000640386 CHD1O14646 1710 aa16.73■□□□□ 0.27
KCNMA1-282ENST00000640386 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
KCNMA1-282ENST00000640386 BIVM-ERCC5R4GMW8 1640 aa16.68■□□□□ 0.26
KCNMA1-282ENST00000640386 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
KCNMA1-282ENST00000640386 WRNQ14191 1432 aaPredicted RBP eCLIP16.66■□□□□ 0.26
KCNMA1-282ENST00000640386 PBRM1Q86U86 1689 aa16.64■□□□□ 0.25
KCNMA1-282ENST00000640386 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
KCNMA1-282ENST00000640386 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
KCNMA1-282ENST00000640386 FBLN2P98095 1184 aa16.63■□□□□ 0.25
KCNMA1-282ENST00000640386 ABCA5Q8WWZ7 1642 aa16.61■□□□□ 0.25
KCNMA1-282ENST00000640386 GRIN2BQ13224 1484 aa16.6■□□□□ 0.25
KCNMA1-282ENST00000640386 GAPVD1Q14C86 1478 aa16.6■□□□□ 0.25
KCNMA1-282ENST00000640386 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
KCNMA1-282ENST00000640386 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
KCNMA1-282ENST00000640386 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
KCNMA1-282ENST00000640386 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
KCNMA1-282ENST00000640386 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
KCNMA1-282ENST00000640386 ARHGEF11O15085 1522 aa16.54■□□□□ 0.24
KCNMA1-282ENST00000640386 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
KCNMA1-282ENST00000640386 SYNJ2O15056 1496 aa16.52■□□□□ 0.24
KCNMA1-282ENST00000640386 CLASP1Q7Z460 1538 aa16.49■□□□□ 0.23
KCNMA1-282ENST00000640386 ADAMTS12P58397 1594 aa16.45■□□□□ 0.22
KCNMA1-282ENST00000640386 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
KCNMA1-282ENST00000640386 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
KCNMA1-282ENST00000640386 ARAP1Q96P48 1450 aa16.4■□□□□ 0.22
KCNMA1-282ENST00000640386 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
KCNMA1-282ENST00000640386 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
KCNMA1-282ENST00000640386 CEP170Q5SW79 1584 aa16.38■□□□□ 0.21
KCNMA1-282ENST00000640386 NUP160Q12769 1436 aa16.34■□□□□ 0.21
KCNMA1-282ENST00000640386 ERCC6L2Q5T890 1561 aa16.32■□□□□ 0.2
KCNMA1-282ENST00000640386 IGF1RP08069 1367 aa16.31■□□□□ 0.2
KCNMA1-282ENST00000640386 KIF27Q86VH2 1401 aa16.3■□□□□ 0.2
KCNMA1-282ENST00000640386 SHROOM2Q13796 1616 aa16.27■□□□□ 0.2
KCNMA1-282ENST00000640386 CUL7Q14999 1698 aa16.24■□□□□ 0.19
KCNMA1-282ENST00000640386 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
KCNMA1-282ENST00000640386 JPH4Q96JJ6 628 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms