RNA–Protein interactions for RNA: ENST00000640335.1

PAX6-269, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-269ENST00000640335 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
PAX6-269ENST00000640335 CCDC180Q9P1Z9 1646 aa33.79■■■■□ 3
PAX6-269ENST00000640335 ABCC9O60706 1549 aa33.45■■■□□ 2.95
PAX6-269ENST00000640335 RB1CC1Q8TDY2 1594 aa32.02■■■□□ 2.72
PAX6-269ENST00000640335 NACADO15069 1562 aa31.9■■■□□ 2.7
PAX6-269ENST00000640335 DCAF8L2P0C7V8 631 aa31.84■■■□□ 2.69
PAX6-269ENST00000640335 MYO15BQ96JP2 1530 aa31.58■■■□□ 2.65
PAX6-269ENST00000640335 ZCCHC6Q5VYS8 1495 aaKnown RBP31.39■■■□□ 2.62
PAX6-269ENST00000640335 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
PAX6-269ENST00000640335 UNC13AQ9UPW8 1703 aa31.28■■■□□ 2.6
PAX6-269ENST00000640335 PABPN1Q86U42 306 aaKnown RBP eCLIP31.23■■■□□ 2.59
PAX6-269ENST00000640335 DNAJC5BQ9UF47 199 aa31.12■■■□□ 2.57
PAX6-269ENST00000640335 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
PAX6-269ENST00000640335 SCRIBQ14160 1630 aa30.76■■■□□ 2.52
PAX6-269ENST00000640335 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.5
PAX6-269ENST00000640335 EIF4G1Q04637 1599 aaKnown RBP30.26■■■□□ 2.43
PAX6-269ENST00000640335 CC2D2AQ9P2K1 1620 aa30.25■■■□□ 2.43
PAX6-269ENST00000640335 CECR2Q9BXF3 1484 aa30.12■■■□□ 2.41
PAX6-269ENST00000640335 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
PAX6-269ENST00000640335 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
PAX6-269ENST00000640335 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
PAX6-269ENST00000640335 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
PAX6-269ENST00000640335 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
PAX6-269ENST00000640335 HMGXB3Q12766 1538 aa29.23■■■□□ 2.27
PAX6-269ENST00000640335 PEG3Q9GZU2 1588 aa29.15■■■□□ 2.26
PAX6-269ENST00000640335 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
PAX6-269ENST00000640335 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
PAX6-269ENST00000640335 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
PAX6-269ENST00000640335 NESP48681 1621 aa28.83■■■□□ 2.21
PAX6-269ENST00000640335 WIZO95785 1651 aa28.8■■■□□ 2.2
PAX6-269ENST00000640335 CUX2O14529 1486 aa28.72■■■□□ 2.19
PAX6-269ENST00000640335 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
PAX6-269ENST00000640335 RSF1Q96T23 1441 aaPredicted RBP28.68■■■□□ 2.18
PAX6-269ENST00000640335 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
PAX6-269ENST00000640335 PDS5BQ9NTI5 1447 aa28.56■■■□□ 2.16
PAX6-269ENST00000640335 KIF21AQ7Z4S6 1674 aa28.47■■■□□ 2.15
PAX6-269ENST00000640335 TOP2AP11388 1531 aaKnown RBP28.45■■■□□ 2.15
PAX6-269ENST00000640335 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
PAX6-269ENST00000640335 DNAJC5Q9H3Z4 198 aa28.38■■■□□ 2.13
PAX6-269ENST00000640335 CFTRP13569 1480 aa28.3■■■□□ 2.12
PAX6-269ENST00000640335 MRC2Q9UBG0 1479 aa28.25■■■□□ 2.11
PAX6-269ENST00000640335 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
PAX6-269ENST00000640335 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
PAX6-269ENST00000640335 WDR62O43379 1518 aa28.17■■■□□ 2.1
PAX6-269ENST00000640335 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
PAX6-269ENST00000640335 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
PAX6-269ENST00000640335 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
PAX6-269ENST00000640335 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
PAX6-269ENST00000640335 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
PAX6-269ENST00000640335 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
PAX6-269ENST00000640335 IFT140Q96RY7 1462 aa27.64■■■□□ 2.02
PAX6-269ENST00000640335 DNMBPQ6XZF7 1577 aa27.64■■■□□ 2.01
PAX6-269ENST00000640335 OSCARQ8IYS5 282 aa27.54■■■□□ 2
PAX6-269ENST00000640335 ZNF608Q9ULD9 1512 aaPredicted RBP27.54■■■□□ 2
PAX6-269ENST00000640335 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
PAX6-269ENST00000640335 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
PAX6-269ENST00000640335 EIF4G3O43432 1585 aaKnown RBP27.39■■□□□ 1.97
PAX6-269ENST00000640335 SOGA1O94964 1423 aa27.37■■□□□ 1.97
PAX6-269ENST00000640335 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.97
PAX6-269ENST00000640335 CUX1P39880 1505 aa27.35■■□□□ 1.97
PAX6-269ENST00000640335 RAD54L2Q9Y4B4 1467 aa27.34■■□□□ 1.97
PAX6-269ENST00000640335 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
PAX6-269ENST00000640335 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
PAX6-269ENST00000640335 TRIM41Q8WV44 630 aa27.23■■□□□ 1.95
PAX6-269ENST00000640335 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
PAX6-269ENST00000640335 FBLN2P98095 1184 aa27.15■■□□□ 1.94
PAX6-269ENST00000640335 CHD1O14646 1710 aa27.14■■□□□ 1.94
PAX6-269ENST00000640335 GRIN2BQ13224 1484 aa27.07■■□□□ 1.92
PAX6-269ENST00000640335 SNAPC4Q5SXM2 1469 aa27.06■■□□□ 1.92
PAX6-269ENST00000640335 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
PAX6-269ENST00000640335 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
PAX6-269ENST00000640335 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
PAX6-269ENST00000640335 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
PAX6-269ENST00000640335 WRNQ14191 1432 aaPredicted RBP eCLIP27.04■■□□□ 1.92
PAX6-269ENST00000640335 MAGI1Q96QZ7 1491 aaPredicted RBP27.04■■□□□ 1.92
PAX6-269ENST00000640335 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
PAX6-269ENST00000640335 CHMP7Q8WUX9 453 aaPredicted RBP27.02■■□□□ 1.92
PAX6-269ENST00000640335 TOP2BQ02880 1626 aa27.01■■□□□ 1.92
PAX6-269ENST00000640335 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
PAX6-269ENST00000640335 ARHGEF11O15085 1522 aa27■■□□□ 1.91
PAX6-269ENST00000640335 PBRM1Q86U86 1689 aa26.96■■□□□ 1.91
PAX6-269ENST00000640335 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
PAX6-269ENST00000640335 ABCA5Q8WWZ7 1642 aa26.94■■□□□ 1.9
PAX6-269ENST00000640335 SYNJ2O15056 1496 aa26.94■■□□□ 1.9
PAX6-269ENST00000640335 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
PAX6-269ENST00000640335 CLASP1Q7Z460 1538 aa26.84■■□□□ 1.89
PAX6-269ENST00000640335 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
PAX6-269ENST00000640335 ERICH3Q5RHP9 1530 aa26.73■■□□□ 1.87
PAX6-269ENST00000640335 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
PAX6-269ENST00000640335 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
PAX6-269ENST00000640335 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
PAX6-269ENST00000640335 NUP160Q12769 1436 aa26.62■■□□□ 1.85
PAX6-269ENST00000640335 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
PAX6-269ENST00000640335 KIF27Q86VH2 1401 aa26.53■■□□□ 1.84
PAX6-269ENST00000640335 IGF1RP08069 1367 aa26.49■■□□□ 1.83
PAX6-269ENST00000640335 SHROOM2Q13796 1616 aa26.46■■□□□ 1.83
PAX6-269ENST00000640335 TRHP20396 242 aaPredicted RBP26.43■■□□□ 1.82
PAX6-269ENST00000640335 ERCC6L2Q5T890 1561 aa26.42■■□□□ 1.82
PAX6-269ENST00000640335 JPH4Q96JJ6 628 aa26.41■■□□□ 1.82
PAX6-269ENST00000640335 CUL7Q14999 1698 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms