RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
PAX6-268ENST00000640287 CCDC180Q9P1Z9 1646 aa31.99■■■□□ 2.71
PAX6-268ENST00000640287 ABCC9O60706 1549 aa31.06■■■□□ 2.56
PAX6-268ENST00000640287 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
PAX6-268ENST00000640287 ZCCHC6Q5VYS8 1495 aaKnown RBP30.21■■■□□ 2.43
PAX6-268ENST00000640287 NACADO15069 1562 aa30.01■■■□□ 2.4
PAX6-268ENST00000640287 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
PAX6-268ENST00000640287 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
PAX6-268ENST00000640287 MYO15BQ96JP2 1530 aa29.9■■■□□ 2.38
PAX6-268ENST00000640287 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
PAX6-268ENST00000640287 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
PAX6-268ENST00000640287 PABPN1Q86U42 306 aaKnown RBP eCLIP29.1■■■□□ 2.25
PAX6-268ENST00000640287 BICRAQ9NZM4 1560 aa29.02■■■□□ 2.24
PAX6-268ENST00000640287 SHROOM4Q9ULL8 1493 aa28.9■■■□□ 2.22
PAX6-268ENST00000640287 EIF4G1Q04637 1599 aaKnown RBP28.27■■■□□ 2.12
PAX6-268ENST00000640287 CECR2Q9BXF3 1484 aa28.16■■■□□ 2.1
PAX6-268ENST00000640287 DNAJC5BQ9UF47 199 aa28.15■■■□□ 2.1
PAX6-268ENST00000640287 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
PAX6-268ENST00000640287 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
PAX6-268ENST00000640287 SMARCA4P51532 1647 aa28■■■□□ 2.07
PAX6-268ENST00000640287 MROH2BQ7Z745 1585 aa27.9■■■□□ 2.06
PAX6-268ENST00000640287 SMARCA2P51531 1590 aa27.77■■■□□ 2.04
PAX6-268ENST00000640287 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
PAX6-268ENST00000640287 RSF1Q96T23 1441 aaPredicted RBP27.7■■■□□ 2.03
PAX6-268ENST00000640287 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
PAX6-268ENST00000640287 NCAPD3P42695 1498 aa27.68■■■□□ 2.02
PAX6-268ENST00000640287 WIZO95785 1651 aa27.62■■■□□ 2.01
PAX6-268ENST00000640287 BAZ1BQ9UIG0 1483 aaKnown RBP27.6■■■□□ 2.01
PAX6-268ENST00000640287 HMGXB3Q12766 1538 aa27.59■■■□□ 2.01
PAX6-268ENST00000640287 SUPT5HO00267 1087 aaKnown RBP27.38■■□□□ 1.97
PAX6-268ENST00000640287 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
PAX6-268ENST00000640287 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
PAX6-268ENST00000640287 NESP48681 1621 aa26.95■■□□□ 1.91
PAX6-268ENST00000640287 CADPSQ9ULU8 1353 aa26.92■■□□□ 1.9
PAX6-268ENST00000640287 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
PAX6-268ENST00000640287 CFTRP13569 1480 aa26.82■■□□□ 1.88
PAX6-268ENST00000640287 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
PAX6-268ENST00000640287 PDS5BQ9NTI5 1447 aa26.76■■□□□ 1.87
PAX6-268ENST00000640287 FANCD2Q9BXW9 1451 aa26.63■■□□□ 1.85
PAX6-268ENST00000640287 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
PAX6-268ENST00000640287 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
PAX6-268ENST00000640287 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
PAX6-268ENST00000640287 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
PAX6-268ENST00000640287 THOC2Q8NI27 1593 aaKnown RBP26.44■■□□□ 1.82
PAX6-268ENST00000640287 WDR62O43379 1518 aa26.34■■□□□ 1.81
PAX6-268ENST00000640287 URB2Q14146 1524 aaKnown RBP26.32■■□□□ 1.8
PAX6-268ENST00000640287 CUX2O14529 1486 aa26.29■■□□□ 1.8
PAX6-268ENST00000640287 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
PAX6-268ENST00000640287 TOPBP1Q92547 1522 aa26.23■■□□□ 1.79
PAX6-268ENST00000640287 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
PAX6-268ENST00000640287 CUX1P39880 1505 aa26.15■■□□□ 1.78
PAX6-268ENST00000640287 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.78
PAX6-268ENST00000640287 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
PAX6-268ENST00000640287 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
PAX6-268ENST00000640287 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
PAX6-268ENST00000640287 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
PAX6-268ENST00000640287 IFT140Q96RY7 1462 aa26■■□□□ 1.75
PAX6-268ENST00000640287 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
PAX6-268ENST00000640287 SOGA1O94964 1423 aa25.96■■□□□ 1.75
PAX6-268ENST00000640287 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
PAX6-268ENST00000640287 TARBP1Q13395 1621 aaKnown RBP25.88■■□□□ 1.73
PAX6-268ENST00000640287 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
PAX6-268ENST00000640287 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
PAX6-268ENST00000640287 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
PAX6-268ENST00000640287 ABCA10Q8WWZ4 1543 aa25.77■■□□□ 1.72
PAX6-268ENST00000640287 AQRO60306 1485 aaKnown RBP eCLIP25.76■■□□□ 1.71
PAX6-268ENST00000640287 EIF4G3O43432 1585 aaKnown RBP25.76■■□□□ 1.71
PAX6-268ENST00000640287 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
PAX6-268ENST00000640287 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
PAX6-268ENST00000640287 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
PAX6-268ENST00000640287 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.69
PAX6-268ENST00000640287 GRIN2BQ13224 1484 aa25.61■■□□□ 1.69
PAX6-268ENST00000640287 KIF27Q86VH2 1401 aa25.58■■□□□ 1.69
PAX6-268ENST00000640287 PBRM1Q86U86 1689 aa25.56■■□□□ 1.68
PAX6-268ENST00000640287 SNAPC4Q5SXM2 1469 aa25.54■■□□□ 1.68
PAX6-268ENST00000640287 MAGI1Q96QZ7 1491 aaPredicted RBP25.49■■□□□ 1.67
PAX6-268ENST00000640287 ERICH3Q5RHP9 1530 aa25.48■■□□□ 1.67
PAX6-268ENST00000640287 FBLN2P98095 1184 aa25.47■■□□□ 1.67
PAX6-268ENST00000640287 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
PAX6-268ENST00000640287 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
PAX6-268ENST00000640287 IGF1RP08069 1367 aa25.39■■□□□ 1.66
PAX6-268ENST00000640287 SYNJ2O15056 1496 aa25.39■■□□□ 1.66
PAX6-268ENST00000640287 ADAMTS12P58397 1594 aa25.38■■□□□ 1.65
PAX6-268ENST00000640287 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
PAX6-268ENST00000640287 CHD1O14646 1710 aa25.35■■□□□ 1.65
PAX6-268ENST00000640287 CUL7Q14999 1698 aa25.32■■□□□ 1.64
PAX6-268ENST00000640287 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
PAX6-268ENST00000640287 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
PAX6-268ENST00000640287 EEA1Q15075 1411 aa25.3■■□□□ 1.64
PAX6-268ENST00000640287 CARMIL1Q5VZK9 1371 aa25.28■■□□□ 1.64
PAX6-268ENST00000640287 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
PAX6-268ENST00000640287 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
PAX6-268ENST00000640287 RAPGEF2Q9Y4G8 1499 aa25.17■■□□□ 1.62
PAX6-268ENST00000640287 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
PAX6-268ENST00000640287 CEP170Q5SW79 1584 aa25.11■■□□□ 1.61
PAX6-268ENST00000640287 NUP160Q12769 1436 aa25.11■■□□□ 1.61
PAX6-268ENST00000640287 DNAJC5Q9H3Z4 198 aa25.09■■□□□ 1.61
PAX6-268ENST00000640287 CLASP1Q7Z460 1538 aa25.06■■□□□ 1.6
PAX6-268ENST00000640287 EHMT2Q96KQ7 1210 aa25.01■■□□□ 1.59
PAX6-268ENST00000640287 KIF21BO75037 1637 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms