RNA–Protein interactions for RNA: ENST00000640242.1

PAX6-266, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-266ENST00000640242 AEBP2Q6ZN18 517 aaPredicted RBP28.07■■■□□ 2.08
PAX6-266ENST00000640242 CHIC1Q5VXU3 224 aa27.02■■□□□ 1.92
PAX6-266ENST00000640242 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
PAX6-266ENST00000640242 SENP3Q9H4L4 574 aaPredicted RBP23.81■■□□□ 1.4
PAX6-266ENST00000640242 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
PAX6-266ENST00000640242 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
PAX6-266ENST00000640242 FOXD1Q16676 465 aa22.19■■□□□ 1.14
PAX6-266ENST00000640242 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
PAX6-266ENST00000640242 PLPPR3Q6T4P5 718 aa21.79■■□□□ 1.08
PAX6-266ENST00000640242 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
PAX6-266ENST00000640242 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
PAX6-266ENST00000640242 MYO15BQ96JP2 1530 aa21.36■■□□□ 1.01
PAX6-266ENST00000640242 ABCC9O60706 1549 aa21.29■■□□□ 1
PAX6-266ENST00000640242 NACADO15069 1562 aa21.2■□□□□ 0.98
PAX6-266ENST00000640242 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
PAX6-266ENST00000640242 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
PAX6-266ENST00000640242 ADRA2BP18089 450 aa21.1■□□□□ 0.97
PAX6-266ENST00000640242 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
PAX6-266ENST00000640242 PIAS4Q8N2W9 510 aaPredicted RBP20.87■□□□□ 0.93
PAX6-266ENST00000640242 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
PAX6-266ENST00000640242 UNC13AQ9UPW8 1703 aa20.62■□□□□ 0.89
PAX6-266ENST00000640242 MSH5O43196 834 aa20.54■□□□□ 0.88
PAX6-266ENST00000640242 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
PAX6-266ENST00000640242 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
PAX6-266ENST00000640242 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
PAX6-266ENST00000640242 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
PAX6-266ENST00000640242 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
PAX6-266ENST00000640242 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
PAX6-266ENST00000640242 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
PAX6-266ENST00000640242 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
PAX6-266ENST00000640242 WIZO95785 1651 aa19.98■□□□□ 0.79
PAX6-266ENST00000640242 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.76
PAX6-266ENST00000640242 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
PAX6-266ENST00000640242 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
PAX6-266ENST00000640242 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
PAX6-266ENST00000640242 ATAD2BQ9ULI0 1458 aa19.63■□□□□ 0.73
PAX6-266ENST00000640242 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
PAX6-266ENST00000640242 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
PAX6-266ENST00000640242 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
PAX6-266ENST00000640242 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
PAX6-266ENST00000640242 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
PAX6-266ENST00000640242 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
PAX6-266ENST00000640242 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
PAX6-266ENST00000640242 MAPK8IP2Q13387 824 aaPredicted RBP19.27■□□□□ 0.68
PAX6-266ENST00000640242 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
PAX6-266ENST00000640242 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
PAX6-266ENST00000640242 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
PAX6-266ENST00000640242 ABCC8Q09428 1581 aa19.13■□□□□ 0.65
PAX6-266ENST00000640242 CFTRP13569 1480 aa19.06■□□□□ 0.64
PAX6-266ENST00000640242 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
PAX6-266ENST00000640242 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
PAX6-266ENST00000640242 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
PAX6-266ENST00000640242 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
PAX6-266ENST00000640242 DMRT2Q9Y5R5 561 aa18.95■□□□□ 0.62
PAX6-266ENST00000640242 TOP2BQ02880 1626 aa18.94■□□□□ 0.62
PAX6-266ENST00000640242 EEA1Q15075 1411 aa18.91■□□□□ 0.62
PAX6-266ENST00000640242 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.62
PAX6-266ENST00000640242 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.6
PAX6-266ENST00000640242 LOC105371045A0A1W2PR82 267 aa18.8■□□□□ 0.6
PAX6-266ENST00000640242 CUX1P39880 1505 aa18.79■□□□□ 0.6
PAX6-266ENST00000640242 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
PAX6-266ENST00000640242 SOGA1O94964 1423 aa18.74■□□□□ 0.59
PAX6-266ENST00000640242 PDS5BQ9NTI5 1447 aa18.7■□□□□ 0.58
PAX6-266ENST00000640242 NESP48681 1621 aa18.7■□□□□ 0.58
PAX6-266ENST00000640242 KCNA4P22459 653 aa18.69■□□□□ 0.58
PAX6-266ENST00000640242 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
PAX6-266ENST00000640242 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
PAX6-266ENST00000640242 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
PAX6-266ENST00000640242 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
PAX6-266ENST00000640242 KIF21BO75037 1637 aa18.66■□□□□ 0.58
PAX6-266ENST00000640242 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.58
PAX6-266ENST00000640242 KIF21AQ7Z4S6 1674 aa18.64■□□□□ 0.57
PAX6-266ENST00000640242 GOLGA3Q08378 1498 aa18.6■□□□□ 0.57
PAX6-266ENST00000640242 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
PAX6-266ENST00000640242 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
PAX6-266ENST00000640242 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
PAX6-266ENST00000640242 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
PAX6-266ENST00000640242 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
PAX6-266ENST00000640242 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
PAX6-266ENST00000640242 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
PAX6-266ENST00000640242 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
PAX6-266ENST00000640242 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
PAX6-266ENST00000640242 CUX2O14529 1486 aa18.47■□□□□ 0.55
PAX6-266ENST00000640242 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
PAX6-266ENST00000640242 UBTFP17480 764 aaKnown RBP18.46■□□□□ 0.55
PAX6-266ENST00000640242 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
PAX6-266ENST00000640242 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
PAX6-266ENST00000640242 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
PAX6-266ENST00000640242 PRXQ9BXM0 1461 aa18.43■□□□□ 0.54
PAX6-266ENST00000640242 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
PAX6-266ENST00000640242 HOXD11P31277 338 aaPredicted RBP18.4■□□□□ 0.54
PAX6-266ENST00000640242 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
PAX6-266ENST00000640242 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.54
PAX6-266ENST00000640242 CUL7Q14999 1698 aa18.38■□□□□ 0.53
PAX6-266ENST00000640242 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
PAX6-266ENST00000640242 WDR62O43379 1518 aa18.34■□□□□ 0.53
PAX6-266ENST00000640242 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
PAX6-266ENST00000640242 IGF1RP08069 1367 aa18.32■□□□□ 0.52
PAX6-266ENST00000640242 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
PAX6-266ENST00000640242 ABCA5Q8WWZ7 1642 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms